Job Description P77295 Confidence 98.14% Date Wed Jan 25 15:21:10 GMT 2012 Rank 74 Aligned Residues 60 % Identity 13% Template c1z05A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, rok family; PDBTitle: crystal structure of the rok family transcriptional regulator, homolog2 of e.coli mlc protein. Resolution 2.00 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.		.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.					.
Query SS confidence																																																	.	.	.	.	.	.					.
Query Sequence		K	R	L	L	I	L	C	M	L	S	G	S	P	G	T	S	A	G	E	L	T	R	I	T	G	L	S	A	S	A	T	S	Q	H	L	A	R	M	R	D	E	G	L	I	D	S	Q	.	.	.	.	.	.	R	D	A	Q	.	R	I	L	Y	S	I	K	N	E
Query Conservation																																																	.	.	.	.	.	.					.
Alig confidence																																																	.	.	.	.	.	.					.
Template Conservation
Template Sequence		N	A	G	R	V	Y	K	L	I	D	Q	K	G	P	I	S	R	I	D	L	S	K	E	S	E	L	A	P	A	S	I	T	K	I	T	R	E	L	I	D	A	H	L	I	H	E	T	T	V	Q	E	A	I	S	R	G	R	P	A	V	G	L	Q	T	N	N	L
Template Known Secondary structure															S	B										T																T	T	S													T	S										T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions