Job Description P77295 Confidence 96.90% Date Wed Jan 25 15:21:10 GMT 2012 Rank 167 Aligned Residues 74 % Identity 15% Template c1q1hA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription factor e; PDBTitle: an extended winged helix domain in general transcription2 factor e/iie alpha Resolution 2.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.
Predicted Secondary structure																																				.																																							.	.
Query SS confidence																																				.																																							.	.
Query Sequence		M	T	E	L	A	Q	L	Q	A	S	A	E	Q	A	A	A	L	L	K	A	M	S	H	P	K	R	L	L	I	L	C	M	L	S	.	G	S	P	G	T	S	A	G	E	L	T	R	I	T	G	L	S	A	S	A	T	S	Q	H	L	A	R	M	R	D	E	G	L	I	D	S	Q	R	.	.	D	A	Q	R	I
Query Conservation																																				.																																							.	.
Alig confidence								.	.	.	.	.	.																							.																																							.	.
Template Conservation								.	.	.	.	.	.
Template Sequence		M	V	N	A	E	D	.	.	.	.	.	.	L	F	I	N	L	A	K	S	L	L	G	D	D	V	I	D	V	L	R	I	L	L	D	K	G	T	E	M	T	D	E	E	I	A	N	Q	L	N	I	K	V	N	D	V	R	K	K	L	N	L	L	E	E	Q	G	F	V	S	Y	R	K	T	R	S	G	W	F	I
Template Known Secondary structure				T	T	T	T	.	.	.	.	.	.								T	T	S		S	T	T												S		B								T	T	T	S																T	S
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.							.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		78	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Y	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		78	.	80

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions