Return to main results Retrieve Phyre Job Id

Job DescriptionP77295
Confidence90.87%DateWed Jan 25 15:21:10 GMT 2012
Rank325Aligned Residues40
% Identity20%Templatec1hlvA_
PDB info PDB header:dna binding protein/dnaChain: A: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60
Predicted Secondary structure 









Query SS confidence 







































Query Sequence  MSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLA
Query Conservation 
    
  

  
      
  


  
 

  


 

 
Alig confidence 







































Template Conservation   
   
  

         
    
  
 
  


     
Template Sequence  LTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILK
Template Known Secondary structure 


TTS
T

Template Predicted Secondary structure 










Template SS confidence 







































   8.10.........20.........30.........40.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions