Job Description P06983 Confidence 90.86% Date Wed Jan 25 15:20:12 GMT 2012 Rank 25 Aligned Residues 155 % Identity 19% Template d2ozza1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.30

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																						.	.	.																	.	.																										.	.
Query SS confidence																						.	.	.																	.	.																										.	.
Query Sequence		V	A	L	L	E	N	R	A	D	I	A	V	H	S	M	K	D	V	P	V	.	.	.	E	F	P	Q	G	L	G	L	V	T	I	C	E	R	E	D	.	.	P	R	D	A	F	V	S	N	N	Y	D	S	L	D	A	L	P	A	G	S	I	V	G	T	S	.	.	S	L	R	R	Q	C	Q	L	A	E	R	R
Query Conservation																						.	.	.																	.	.																										.	.
Alig confidence																.	.					.	.	.																	.	.																	.	.	.	.						.	.
Template Conservation																.	.																																										.	.	.	.
Template Sequence		E	C	L	L	N	G	V	Y	D	X	A	V	V	S	.	.	R	L	A	A	E	S	Y	L	S	Q	N	N	L	C	I	A	L	E	L	G	P	H	T	Y	V	G	E	H	Q	L	I	C	R	K	G	E	S	G	N	V	K	.	.	.	.	R	V	G	L	D	S	R	S	A	D	Q	K	I	X	T	D	V	F	F
Template Known Secondary structure						T	T	S		S						.	.											S										T	T	S	S	S									T	T		G	G	G			.	.	.	.						T	T
Template Predicted Secondary structure																.	.																																										.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	L	I	I	R	S	L	R	G	N	V	G	T	R	L	S	K	L	D	N	G	E	Y	D	A	I	I	L	A	V	A	G	L	K	R	L	G	L	E	S	R	I	R	A	A	L	P	P	E	I	S	L	P	A	V	G	Q	G	A	V	G	I	E	C	R	L	D	D	S	R	T	R	E	L	L	A	A	L	N
Query Conservation
Alig confidence																																													.													.	.
Template Conservation																																													.													.	.
Template Sequence		G	D	S	D	V	E	R	V	D	L	S	Y	H	E	S	L	Q	R	I	V	K	G	D	V	D	A	V	I	W	N	V	A	E	N	E	L	T	X	L	G	L	E	A	.	T	P	L	T	D	D	P	R	F	L	Q	A	.	.	T	E	A	V	V	L	T	R	V	D	D	Y	P	X	Q	Q	L	L	R	A	V	V
Template Known Secondary structure		T	T	S																			T	S																T	T				.					S							T	.	.	T								T	T
Template Predicted Secondary structure																																													.													.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	E	T	A	L	R	V	T	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	H	A	L	L	A	H	Q	Q	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions