 |
Job Description | P06983 | Confidence | 73.94% | Date | Wed Jan 25 15:20:12 GMT 2012 |
Rank | 35 | Aligned Residues | 63 |
% Identity | 16% | Template | d2nxoa1 |
SCOP info | Periplasmic binding protein-like II
| Periplasmic binding protein-like II
| Phosphate binding protein-like
|
Resolution | 2.04 |
|
 |
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | |
|
. | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . | . |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | E | V | A | L | L | E | N | R | A | D | I | A | V | H | S | M | K | D | V | P | V | E | F | P | Q | G | L | . |
. |
G | L | V | T | I | C | E | R | E | D | P | R | D | A | F | V | S | N | N | Y | D | S | L | D | A | L | P | A | G | S | I | V | G | T | S | S |
Query Conservation |   |
|
|
|   |
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|
| . | . |   |
|   |
|
|   |   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |
|
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |
|
| . |
|
|
|   |
|   |
|   |   |
Template Sequence |   |
K | L | S | E | Q | L | V | R | G | D | L | D | I | G | P | V | T | L | V | E | F | L | K | N | A | D | D | L | V | A | F | P | D | I | A | V | G | C | D | G | P | V | M | S | C | V | I | V | S | Q | . |
V | P | L | D | R | L | . |
D | G | A | R | V | A | L | G | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T | S |
| S |  |  |  |  |  |  |  |  |  |  |  | T | G | G | G |  |  |  |  |  |  |  |  |  |  |  | S | S |
|
| S | S |  |  |  |  |  | S | . | S |
| T | T | S |
| . | S | S | S |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
| . |
|
|  |  |  |  | . |
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
. | . | . | . | . | . | |
. | . | 100 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|