Job Description P06983 Confidence 97.06% Date Wed Jan 25 15:20:12 GMT 2012 Rank 14 Aligned Residues 196 % Identity 16% Template d1xs5a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.85

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	V	L	R	I	A	T	R	Q	S	P	L	A	L	W	Q	A	H	Y	V	K	D	K	L	M	A	S	H	P	G	L	V	V	E	L	V	P	M	V	T	R	G	D	V	I	L	D	T	P	L	A	K	V	G	G	K	G	L	F	V	K	E	L	E	V	A	L	L	E	N	R	A	D	I	A	V	H	S	M
Query Conservation
Alig confidence																		.												.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.												.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	T	V	G	V	G	V	L	S	E	P	H	A	R	L	.	L	E	I	A	K	E	E	V	K	K	Q	.	.	H	I	E	L	R	I	V	E	F	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	A	L	N	E	A	V	M	R	G	D	I	L	M	N	F	F	Q	H
Template Known Secondary structure											S	T	T					.										T	T	.	.	T									S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	S	S	S
Template Predicted Secondary structure																		.												.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.																				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		83	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	D	V	P	V	E	F	P	Q	.	.	G	L	G	L	V	T	I	C	E	R	E	D	P	R	D	A	F	V	S	N	N	Y	D	S	L	D	A	L	P	A	G	S	I	V	G	T	S	S	L	R	R	Q	C	Q	L	A	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation											.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	H	M	Q	Q	F	N	Q	E	H	N	G	D	L	V	S	V	G	N	V	H	V	E	P	L	A	L	Y	S	R	T	Y	R	H	V	S	D	F	P	A	G	A	V	I	A	I	P	N	D	S	S	N	E	A	R	A	L	R	L	L	E	A	A	G	F	I	R	M	R	A	G	S	G	L	F	A	T	V	E
Template Known Secondary structure													T																			S	S			S	G	G	G			T	T								S														T	T	S					T	T			T	T			G	G
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
							140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	R	P	D	L	I	I	R	S	L	R	G	N	V	G	T	R	L	S	K	L	D	N	G	E	Y	D	A	I	I	L	A	V	A	G	L	K	R	L	G	L	E	S	R	I	R	A	A	L	P	P	E	I	S	L	P	A	V	G	Q	G	A	V	G	I	E	C	R	L	D	D	S	R	T	R	E
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																			.	.	.	.																																					.
Template Conservation																									.	.	.	.																																					.
Template Sequence		D	V	Q	Q	N	V	R	N	V	V	L	Q	E	V	E	S	A	L	L	P	R	V	F	.	.	.	.	D	Q	V	D	G	A	V	I	N	G	N	Y	A	I	M	A	G	L	S	A	R	R	D	G	L	A	V	E	P	D	A	S	A	Y	A	N	.	V	L	V	V	K	R	G	N	E	A	D	A	R	V	Q	A
Template Known Secondary structure		G					T	T									G	G	G					G	.	.	.	.	G	G	S	S												T	T			T	T	T	T		S				S		G	G	G	G			.						T	T		T	T
Template Predicted Secondary structure																									.	.	.	.																																					.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	A	L	N	H	H	E	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	R	A	L	C	G	G	R	V	R
Template Known Secondary structure							T	S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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