Job Description P06983 Confidence 17.25% Date Wed Jan 25 15:20:12 GMT 2012 Rank 88 Aligned Residues 169 % Identity 14% Template d1lsta_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.80

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.											.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		A	H	Y	V	K	D	K	L	M	A	S	H	P	G	L	V	V	E	L	V	P	M	V	T	R	G	D	V	I	L	D	T	P	L	A	K	V	G	G	K	G	L	F	V	K	E	L	E	V	A	L	L	E	N	R	A	D	I	A	V	H	S	M	K	.	.	.	.	.	.	.	.	.	.	D	V	P	V	E	F
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	L	G	N	E	M	C	K	R	M	.	.	Q	V	K	C	T	W	V	A	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	A	L	I	P	S	L	K	A	K	K	I	D	A	I	I	S	S	L	S	I	T	D	K	R	Q	Q	E	I	A	F	S	D	K	L	Y
Template Known Secondary structure													.	.	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G							T	T	S		S				S	S		B													S		S	B
Template Predicted Secondary structure													.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.																					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	G	L	G	L	V	T	I	C	E	R	E	D	P	R	D	A	F	V	S	N	N	Y	D	S	L	D	A	L	P	A	G	S	I	V	G	T	S	S	L	R	R	Q	C	Q	L	A	E	R	R	P	D	L	I	I	R	S	L	R	G	N	V	G	T	R	L	S	K	L	D	N	G	E	Y	D	A	I	I	L
Query Conservation
Alig confidence																				.	.	.	.	.	.	.																																				.
Template Conservation																				.	.	.	.	.	.	.																																				.
Template Sequence		A	A	D	S	R	L	I	A	A	K	G	S	P	I	Q	P	T	L	.	.	.	.	.	.	.	E	S	L	K	G	K	H	V	G	V	L	Q	G	S	T	Q	E	A	Y	A	N	D	N	W	R	T	K	G	V	D	V	V	A	Y	A	.	N	Q	D	L	I	Y	S	D	L	T	A	G	R	L	D	A	A	L	Q
Template Known Secondary structure											T	T					S	S		.	.	.	.	.	.	.				T	T							T	T	S										T	G	G	G	T							S	.	S										T	T	S		S
Template Predicted Secondary structure																				.	.	.	.	.	.	.																																				.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.								.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		A	V	A	G	L	K	R	L	G	L	E	S	R	I	R	.	.	.	A	A	L	P	P	E	I	S	L	P	A	V	G	Q	G	A	V	G	I	E	C	R	L	D	D	S	R	T	R	E	L	L	A	A
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		D	E	V	A	A	S	E	G	F	L	K	Q	P	A	G	K	E	Y	A	F	A	G	P	S	V	K	D	K	K	Y	F	G	D	G	T	G	V	G	L	R	K	D	D	T	E	L	K	A	A	F	D	K
Template Known Secondary structure										T	T	T	S	G	G	G	T	T					S	S		B								S	S	B						T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions