Job Description P06983 Confidence 97.17% Date Wed Jan 25 15:20:12 GMT 2012 Rank 11 Aligned Residues 212 % Identity 17% Template c3uifA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sulfonate abc transporter, periplasmic sulfonate-binding PDBTitle: crystal structure of putative sulfonate abc transporter, periplasmic2 sulfonate-binding protein ssua from methylobacillus flagellatus kt Resolution 2.60 Å

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		4	.	.	.	.	.	10											.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.																																	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.																																	.	.
Query Sequence		N	V	L	R	I	A	T	.	.	.	.	.	.	.	.	.	.	R	Q	S	P	L	A	L	W	Q	A	H	Y	V	K	D	K	L	M	A	S	H	P	G	L	V	V	E	L	V	P	M	V	.	.	T	R	G	D	V	I	L	D	T	P	L	A	K	V	G	G	K	G	L	F	V	K	E	L	E	V	A	L	L
Query Conservation									.	.	.	.	.	.	.	.	.	.																																	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.																					.	.											.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	V	R	I	A	S	V	A	T	N	V	G	G	K	T	V	Y	A	G	S	A	S	L	V	V	N	G	A	F	P	E	E	L	R	K	Q	.	.	G	I	K	V	E	W	V	P	A	A	X	A	S	V	G	P	V	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	F	A
Template Known Secondary structure														T	T						T								S	S								T	.	.	T										T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.																			.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.																			.	.																												.	.	.	.	.	.	.	.
Query SS confidence																									.	.																			.	.																												.	.	.	.	.	.	.	.
Query Sequence		E	N	R	A	D	I	A	V	H	S	M	K	D	V	P	V	E	F	P	Q	G	L	G	.	.	L	V	T	I	C	E	R	E	D	P	R	D	A	F	V	S	N	N	.	.	Y	D	S	L	D	A	L	P	A	G	S	I	V	G	T	S	S	L	R	R	Q	C	Q	L	A	E	R	.	.	.	.	.	.	.	.
Query Conservation																									.	.																			.	.																												.	.	.	.	.	.	.	.
Alig confidence																									.	.																			.	.								.																				.	.	.	.	.	.	.	.
Template Conservation																																																						.
Template Sequence		S	G	K	I	D	F	G	I	Y	G	D	L	P	P	I	I	L	N	A	S	K	P	T	V	Q	L	V	A	P	W	G	T	T	S	N	S	Y	L	V	V	P	K	N	S	T	A	K	S	I	K	D	L	.	K	G	K	K	I	A	L	H	R	G	R	P	W	E	L	A	F	S	N	L	L	Q	S	E	G	L	T
Template Known Secondary structure		T	T									S										S																					T	T					S	G	G	G	G	.	T	T	S						T	T	S	T												T	T
Template Predicted Secondary structure																																																						.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.
Query SS confidence																																																																			.	.	.
Query Sequence		R	P	D	L	I	I	R	S	L	R	G	N	V	G	T	R	L	S	K	L	D	N	G	E	Y	D	A	I	I	L	A	V	A	G	L	K	R	L	G	L	E	S	R	I	R	A	A	L	P	P	E	I	S	L	P	A	V	G	Q	G	A	V	G	I	E	.	.	.	C	R	L	D	D	S	R	T	R	E	L	L
Query Conservation																																																																			.	.	.
Alig confidence											.	.																																																							.	.	.
Template Conservation											.	.
Template Sequence		F	K	D	F	K	I	V	N	V	.	.	N	P	Q	V	G	A	A	A	L	A	S	G	T	V	D	G	F	F	S	L	F	D	S	Y	I	L	E	D	R	G	V	G	K	I	I	W	S	T	K	T	A	P	V	D	W	K	L	X	G	G	V	W	A	R	N	D	F	V	K	Q	N	P	E	I	T	Q	A	I	V
Template Known Secondary structure		G	G	G	S						.	.												T	S	S	S					S	T	T							T	T	S							G	G	G	S		G	G	G	S
Template Predicted Secondary structure											.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	N	H	H	E	T	A	L	R	V	T	A	E	R	A	M	N	T	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	Y	L	K	S	V	H	W	V	A	Q	D	E	N	K	E	T	Y	I	R	E
Template Known Secondary structure													S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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