Job Description P06983 Confidence 39.22% Date Wed Jan 25 15:20:12 GMT 2012 Rank 55 Aligned Residues 57 % Identity 16% Template c3r6uA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:choline-binding protein; PDBTitle: crystal structure of choline binding protein opubc from bacillus2 subtilis Resolution 1.61 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	L	R	I	A	T	R	Q	S	P	L	A	L	W	Q	A	H	Y	V	K	D	K	L	M	A	S	H	P	G	L	V	V	E	L	V	P	M	V	T	R	G	D	V	I	L	D	T	P	L	A	K	V	G	G	K	G	L	F	V	K	E	L	E	V	A	L	L	E	N	R	A	D	I	A	V
Query Conservation
Alig confidence																														.											.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.											.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	I	K	I	G	A	Q	S	M	S	E	S	E	I	I	A	S	M	L	G	Q	L	I	E	H	H	T	.	D	L	K	T	T	T	I	K	N	L	.	.	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	V	Q	Q	Q	A	L	M	N	G	E	I	D	I	A	A
Template Known Secondary structure										S	S																		S	.	S										.	.		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	S		S
Template Predicted Secondary structure																														.											.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.			50	.																	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions