Job Description P06983 Confidence 95.48% Date Wed Jan 25 15:20:12 GMT 2012 Rank 18 Aligned Residues 149 % Identity 18% Template c3qslA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: structure of cae31940 from bordetella bronchiseptica rb50 Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		M	L	D	N	V	L	R	I	A	T	R	Q	S	P	L	A	L	W	Q	A	H	Y	V	K	D	K	.	.	.	L	M	A	S	H	P	G	L	V	V	E	L	V	P	M	V	T	R	G	D	V	I	L	D	T	P	L	A	K	V	G	G	K	G	L	F	V	K	E	L	E	V	A	L	L	E	N	R	A	D	I
Query Conservation																												.	.	.
Alig confidence																												.	.	.					.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	K	A	K	V	Q	I	A	V	G	G	K	P	L	I	Y	Y	L	P	L	T	I	A	E	V	K	G	F	F	K	D	E	.	.	G	L	D	V	S	I	A	D	F	A	G	G	S	K	A	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	V	G	G	S	A	D	V
Template Known Secondary structure			S		S							S		T	T	S	G	G	G									T	T					T	.	.	T									S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S		S
Template Predicted Secondary structure																																			.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.																				80	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.									130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																	.	.																						.	.	.	.																	.	.	.	.	.	.	.	.
Query SS confidence																	.	.																						.	.	.	.																	.	.	.	.	.	.	.	.
Query Sequence		A	V	H	S	M	K	D	V	P	V	E	F	P	Q	G	.	.	L	G	L	V	T	I	C	E	R	E	D	P	R	D	A	F	V	S	N	N	Y	.	.	.	.	D	S	L	D	A	L	P	A	G	S	I	V	G	T	S	S	.	.	.	.	.	.	.	.	L	R	R	Q	C	Q	L	A	E	R	R	P	D	L
Query Conservation																	.	.																						.	.	.	.																	.	.	.	.	.	.	.	.
Alig confidence																	.	.																						.	.	.	.							.										.	.	.	.	.	.	.	.
Template Conservation																																																		.
Template Sequence		V	S	G	A	F	E	H	T	L	S	L	Q	A	K	G	Q	F	Y	R	A	F	A	L	Q	G	R	A	P	X	I	G	V	G	V	S	K	K	N	L	P	G	Y	K	G	P	A	D	L	.	K	G	R	K	I	G	V	T	A	P	G	S	S	T	N	X	V	V	N	F	F	L	A	K	H	G	L	K	A	S	D
Template Known Secondary structure						T									T	T									S	B	S	S									T	T	T		T	T			S	G	G	G	G	.	T	T						S	S	T	T	S													T	T			G	G	G
Template Predicted Secondary structure																																																		.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	R	S	L	R	G	N	V	G	T	R	L	S	K	L	D	N	G	E	Y	D	A	I	I	L	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	F	I	G	V	G	A	G	A	G	A	V	T	A	L	R	S	G	Q	I	D	A	I	S	N	T	D
Template Known Secondary structure		S							S	S										T	S		S						T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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