 |
Job Description | P06983 | Confidence | 15.98% | Date | Wed Jan 25 15:20:12 GMT 2012 |
Rank | 93 | Aligned Residues | 36 |
% Identity | 14% | Template | c3kosA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:hth-type transcriptional activator ampr; |
PDBTitle: structure of the ampr effector binding domain from citrobacter2 freundii
|
Resolution | 1.83 Å |
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | V | L | R | I | A | T | R | Q | S | P | L | A | L | W | Q | A | H | Y | V | K | D | K | L | M | A | S | H | P | G | L | V | V | E | L | V | P |
Query Conservation |   |
  |   |
|   |
|
|
|
|   |
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |   |   |
| . |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|   |
|   |
|   |   |
Template Sequence |   |
E | K | L | K | I | G | V | V | G | T | . |
F | A | I | G | C | L | F | P | L | L | S | D | F | K | R | S | Y | P | H | I | D | L | H | I | S | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | |
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|