Job Description P06983 Confidence 92.27% Date Wed Jan 25 15:20:12 GMT 2012 Rank 22 Aligned Residues 65 % Identity 32% Template c2h9bB_ PDB info PDB header:transcription Chain: B: PDB Molecule:hth-type transcriptional regulator benm; PDBTitle: crystal structure of the effector binding domain of a benm variant2 (benm r156h/t157s) Resolution 1.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	V	L	R	I	A	T	R	Q	S	P	L	A	L	W	Q	A	H	Y	V	K	D	K	L	M	A	S	H	P	G	L	V	V	E	L	V	P	M	V	T	R	G	D	V	I	L	D	T	P	L	A	K	V	G	G	K	G	L	F	V	K	E	L	E	V	A	L	L	E	N	R	A	D	I	A	V	H	S	M
Query Conservation
Alig confidence													.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	T	I	R	I	G	F	V	G	S	.	L	L	F	G	L	L	P	R	I	I	H	L	Y	R	Q	A	H	P	N	L	R	I	E	L	Y	E	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	A	Q	T	E	A	L	K	E	G	R	I	D	A	G	F	G	R	L
Template Known Secondary structure											G	G	.	G	G	G	T	T													T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	S		S					S	S
Template Predicted Secondary structure													.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		83	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	V	P	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	S	D	P	A
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions