 |
Job Description | P25742 | Confidence | 24.79% | Date | Thu Jan 5 11:42:29 GMT 2012 |
Rank | 95 | Aligned Residues | 72 |
% Identity | 7% | Template | d2ez9a1 |
SCOP info | DHS-like NAD/FAD-binding domain
| DHS-like NAD/FAD-binding domain
| Pyruvate oxidase and decarboxylase, middle domain
|
Resolution | 1.60 |
|
 |
  |   |
188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 250 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | N | D | K | F | S | K | V | I | D | A | L | Q | Q | R | G | Y | Q | V | V | L | T | C | G | P | S | A | D | D | L | A | C | V | D | E | I | A | R | G | C | E | T | K | P | I | T | G | L | A | G | K | T | R | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | E | L | G | A | L | I | D | H | A |
Query Conservation |   |
  |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
Template Sequence |   |
D | V | Q | A | V | T | R | L | T | Q | T | L | L | A | A | E | R | P | L | I | Y | Y | G | I | G | A | R | K | A | G | K | E | L | E | Q | L | S | K | T | L | K | I | P | L | M | S | T | Y | P | A | K | G | I | V | A | D | R | Y | P | A | Y | L | G | S | A | N | R | V | A | Q | K | P | A | N | E | A | L | A | Q | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |
| G | G | G | T | T |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
| G | G | G | T | T | S | S |
| T | T |
| T | T | B |
|
|
|
| S | S | S | S |
|  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
198 | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . |
  |
  |   |
252 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | F | I | G | V | D | S |
Query Conservation |   |
  |
|   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|   |
Template Sequence |   |
D | V | V | L | F | V | G | N |
Template Known Secondary structure |   |
S |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
278 | . | 280 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|