Job Description P25742 Confidence 86.37% Date Thu Jan 5 11:42:29 GMT 2012 Rank 49 Aligned Residues 310 % Identity 10% Template d2c1xa1 SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase UDPGT-like Resolution 1.9

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60																			.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	M	L	L	T	T	P	V	I	S	T	L	K	Q	N	Y	P	D	A	K	I	D	M	L	L	Y	Q	D	T	I	P	I	L	S	E	N	P	E	I	N	A	L	Y	G	I	S	N	K	G	A	G	T	F	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	N	V	L	S
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.
Template Sequence		T	H	A	A	P	L	L	A	V	V	R	R	L	A	A	A	A	P	H	A	V	F	S	F	F	S	T	S	Q	S	N	A	S	I	F	Q	C	N	I	.	.	K	S	Y	D	I	S	D	G	V	P	E	G	Y	V	F	A	G	R	P	Q	E	D	I	E	L	F	T	R	A	A	P	E	S	F	R	Q	G	M	V
Template Known Secondary structure		S	S																T	T	S																	T	T		.	.											T	T							T	T
Template Predicted Secondary structure																																									.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																																			.	.	.	.	110	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	K	T	L	R	A	N	N	Y	D	L	V	I	N	L	T	D	Q	W	M	V	A	L	L	V	R	C	L	P	A	R	M	K	I	S	Q	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	R	Q	H	G	I
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	V	A	E	T	G	R	P	V	S	C	L	V	A	D	A	F	I	W	F	A	A	D	M	A	A	E	M	G	V	A	W	L	P	F	W	T	A	G	P	N	S	L	S	T	H	V	Y	I	D	E	I	R	E	K	I	G	V	S	G	I	Q	G	R	E	D	E	L	L	N	F	I	P	G	M	S	K	V	R
Template Known Secondary structure								T										T	T	S	T	T									T									S										T										S	S			T	T		T	T		B		T	T	S	T	T		T	T		B
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.																					.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	K	K	S	F	T	H	L	A	P	I	H	G	T	H	I	V	E	R	N	L	S	V	L	E	P	L	G	I	T	D	F	Y	T	D	T	T	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	E	D	C	W	K	K	M	R	R	E	L	D	A	L	G	V	K	D	H
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	D	L	Q	E	G	I	V	F	G	N	L	N	S	L	F	S	R	M	L	H	R	M	G	Q	V	L	P	K	A	T	A	V	F	I	N	S	F	E	E	L	D	D	S	L	T	N	D	L	K	S	K	L	K	T	Y	L	N	I	G	P	F	N	L	I	T	G	C	L	Q	W	L	K	E	R	K	P	T	S
Template Known Secondary structure		G	G	G	S		T	T	T	S	S	S		T	T	S													G	G	G	S	S					S	S		G	G	G												S	S																				T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		Y	V	V	I	Q	P	T	A	R	Q	I	F	K	C	W	D	N	D	K	F	S	K	V	I	D	A	L	Q	Q	R	G	Y	Q	V	V	L	T	C	G	P	S	A	D	D	L	A	C	V	D	E	I	A	R	G	C	E	T	K	P	I	T	G	L	A	G	K	T	R	F	P	E	L	G	A	L	I	.	.	D	H
Query Conservation																																																																														.	.
Alig confidence												.	.	.																																																					.	.	.	.	.	.						.	.
Template Conservation												.	.	.																																																					.	.	.	.	.	.
Template Sequence		V	V	Y	I	S	F	G	T	V	T	.	.	.	T	P	P	P	A	E	V	V	A	L	S	E	A	L	E	A	S	R	V	P	F	I	W	S	L	R	D	K	A	R	V	H	L	P	E	G	F	L	E	K	T	R	G	Y	G	M	V	V	P	W	A	P	.	.	.	.	.	.	Q	A	E	V	L	A	H	E	A
Template Known Secondary structure									S	S		.	.	.																		T									G	G	G	G	G	G	S		T	T						T	T	T					S				.	.	.	.	.	.						T	S	T	T
Template Predicted Secondary structure												.	.	.																																																					.	.	.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.				.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.							.	.	.	.	.	340	.	.	.
		251	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure									.																															.	.			.
Query SS confidence									.																															.	.			.
Query Sequence		A	V	L	F	I	G	V	.	D	S	A	P	G	H	I	A	A	A	V	K	T	P	V	I	S	L	F	G	A	T	D	H	V	F	W	R	P	W	.	.	T	E	.	N	I	I	Q	F	W	A	G	N	Y	Q	K	M	P	T	R	H	E	L	D	R	N	K	K	Y	L	S	V	I	P	A	E	D	V	I	A	A
Query Conservation									.																															.	.			.
Alig confidence									.																															.	.			.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	A	F	V	T	H	C	G	W	N	S	L	W	E	S	V	A	G	G	V	P	L	I	C	R	P	F	F	G	D	Q	R	L	N	G	R	M	V	E	D	V	L	E	I	G	V	R	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	V	F	T	K	S	G	L	M	S	C
Template Known Secondary structure																					T									S	T	T											T	S							G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.																			.	.	.	.	.	.	400	.	.	.	.	.
		327	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		T	E	K	L	L	P	E	D	A	.	P	S	A	D	R	N	A	Q
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		F	D	Q	I	L	S	Q	E	K	G	K	K	L	R	E	N	L	R
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions