Job Description P25742 Confidence 97.75% Date Thu Jan 5 11:42:29 GMT 2012 Rank 14 Aligned Residues 304 % Identity 16% Template d1pn3a_ SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Gtf glycosyltransferase Resolution 2.80

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60													.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	M	L	L	T	T	P	V	I	S	T	L	K	Q	N	Y	P	D	A	K	I	D	M	L	L	Y	Q	D	T	I	P	I	L	S	E	N	P	E	I	N	A	L	Y	G	I	S	N	K	G	A	G	T	F	D	K	.	.	.	.	.	.	.	.	.	.	.	.	I	K	N	V	L	S	L	I	K	T	L	R
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																						.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.																						.	.
Template Sequence		G	D	T	E	P	L	V	A	L	A	A	R	L	R	E	L	.	.	G	A	D	A	R	M	C	L	P	P	D	Y	V	E	R	C	A	E	V	G	V	.	.	P	M	V	P	V	G	R	A	V	R	A	G	A	R	E	P	G	E	L	P	P	G	A	A	E	V	V	T	E	V	V	A	E	W	F	D	K	V	P
Template Known Secondary structure																	T	.	.	T									G	G	G								T		.	.						S	S		S	S	G	G	G	S		T	T				T	T		G	G	G
Template Predicted Secondary structure																		.	.																						.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		73			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.																																																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.																																																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	.	.	N	N	Y	D	L	V	I	N	L	T	D	Q	W	M	V	A	L	L	V	R	C	L	P	A	R	M	K	I	S	Q	L	Y	G	H	R	Q	H	G	I	W	K	K	S	F	T	H	L	A	P	I	H	G	T	H	I	V	E	R	N	L	S	V	L	E	P	L	.	.	.	.	.	.	.	.	.	.	.
Query Conservation			.	.																																																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.																																																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	I	E	G	C	D	A	V	V	T	T	G	L	L	P	A	A	V	A	V	R	S	M	A	E	K	L	G	I	P	Y	R	Y	T	V	L	S	P	D	H	L	P	S	E	Q	S	Q	A	E	R	D	M	Y	N	Q	G	A	D	R	L	F	G	D	A	V	N	S	H	R	A	S	I	G	L	P	P	V	E	H
Template Known Secondary structure					T	T		S																						T								S	S	G	G	G	S	G	G	G	S																T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
																								140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	T	D	F	Y	T	D	T	T	M	S	Y	A	E	D	C	W	K	K	M	R	R	E	L	D	A	L	G	V	K	D	H	Y	V	V	I	Q	P	T	A	R	Q	I	F	K	C	W	D	N	D	K	F	S	K	V	I	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Template Conservation																																																																							.	.
Template Sequence		L	Y	D	Y	G	Y	T	D	Q	P	W	L	A	A	D	P	V	L	S	P	L	R	P	T	D	L	G	T	V	Q	T	G	A	W	I	L	P	D	E	R	P	L	S	A	E	L	E	A	F	L	A	A	G	S	T	P	V	Y	V	G	F	G	S	S	S	R	P	A	T	.	.	A	D	A	A	K	M	A	I	K
Template Known Secondary structure									S	S					S		T	T	T	S				T	T			S			B																				T	T	S	S	S								T	T			S	T			.	.
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		A	L	Q	Q	R	G	Y	Q	V	V	L	T	C	G	P	S	A	D	D	L	A	C	V	D	E	I	A	R	G	C	E	T	K	P	I	T	G	L	A	G	K	T	R	F	P	E	L	G	A	L	I	D	H	A	V	L	F	I	G	V	D	S	.	A	P	G	H	I	A	A	A	V	K	T	P	V	I	S	L	F
Query Conservation																																																																.
Alig confidence																							.	.	.	.	.	.	.	.	.																		.	.	.													.
Template Conservation																							.	.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		A	V	R	A	S	G	R	R	I	V	L	S	R	G	W	A	D	L	V	L	P	.	.	.	.	.	.	.	.	.	D	D	G	A	D	C	F	V	V	G	E	V	N	L	Q	E	L	.	.	.	F	G	R	V	A	A	A	I	H	H	D	S	A	G	T	T	L	L	A	M	R	A	G	I	P	Q	I	V	V	R
Template Known Secondary structure						T	T								T	T	T	T				S	.	.	.	.	.	.	.	.	.	S			T	T					S	S							.	.	.		T	T	S	S						S												T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.										.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.				.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.							290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.			.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.																																														.	.
Query SS confidence															.	.	.	.	.	.																																														.	.
Query Sequence		G	A	T	D	H	V	F	W	R	P	W	T	E	.	.	.	.	.	.	N	I	I	Q	F	W	A	G	N	Y	Q	K	M	P	T	R	H	E	L	D	R	N	K	K	Y	L	S	V	I	P	A	E	D	V	I	A	A	T	E	K	L	L	P	E	D	.	.	A	P	S	A	D	R	N	A	Q	L
Query Conservation															.	.	.	.	.	.																																														.	.
Alig confidence															.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	V	D	N	V	V	E	Q	A	Y	H	A	D	R	V	A	E	L	G	V	G	V	A	V	D	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	T	I	D	S	L	S	A	A	L	D	T	A	L	A	P	E	I	R	A	R	A	T	T	V	A	D	T	I
Template Known Secondary structure		S	S			B	T	T	B												T	S							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S														T	S	T	T									G	G	G	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.																			.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions