Job Description P25742 Confidence 100.00% Date Thu Jan 5 11:42:29 GMT 2012 Rank 1 Aligned Residues 325 % Identity 24% Template c3tovB_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycosyl transferase family 9; PDBTitle: the crystal structure of the glycosyl transferase family 9 from2 veillonella parvula dsm 2008 Resolution 2.98 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		M	R	Y	H	G	D	M	L	L	T	T	P	V	I	S	T	L	K	Q	N	Y	P	D	A	K	I	D	M	L	L	Y	Q	D	T	I	P	I	L	S	E	N	P	E	I	N	A	L	Y	G	I	S	N	K	G	A	G	T	F	D	K	I	K	N	V	L	S	L	I	K	T	L	R	A	N	.	N	Y	D	L	V
Query Conservation																																																																												.
Alig confidence																																																							.	.																				.
Template Conservation																																																							.	.
Template Sequence		L	X	H	L	G	D	V	I	L	T	T	P	F	L	E	V	L	R	K	A	A	P	H	S	H	I	T	Y	V	I	D	E	K	L	Q	Q	V	X	E	Y	N	P	N	I	D	E	L	I	V	V	D	K	K	.	.	G	R	H	N	S	I	S	G	L	N	E	V	A	R	E	I	N	A	K	G	K	T	D	I	V
Template Known Secondary structure											T												T	T									G	G	G	G	G	G	T	T	T		T	T		S							T	T	.	.	T	T	T	S	S
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		I	N	L	T	D	Q	W	M	V	A	L	L	V	R	C	L	P	A	R	M	K	I	S	Q	L	Y	G	H	R	Q	H	G	I	W	K	K	S	F	T	H	L	A	P	I	H	G	T	H	I	V	E	R	N	L	S	V	L	E	P	L	G	I	.	T	D	F	Y	T	D	T	T	M	S	Y	A	E	D	C	W	K
Query Conservation																																																																.
Alig confidence																																	.	.	.																													.
Template Conservation																																	.	.	.
Template Sequence		I	N	L	H	P	N	E	R	T	S	Y	L	A	W	K	I	H	A	P	I	T	T	G	X	S	H	F	L	F	R	P	.	.	.	F	X	T	K	Y	T	R	L	D	R	K	T	R	H	A	A	D	X	Y	I	N	V	L	E	Q	L	G	V	T	D	T	S	N	S	G	L	H	I	E	I	C	E	E	W	R	C
Template Known Secondary structure							S													S								G	G	G	G	G	.	.	.	G		S							T	T	T	S														T								S	S
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		K	M	R	R	E	L	D	A	L	G	V	K	.	.	D	H	Y	V	V	I	Q	P	T	A	R	Q	I	F	K	C	W	D	N	D	K	F	S	K	V	I	D	A	L	Q	Q	R	G	Y	Q	V	V	L	T	C	G	P	S	A	D	D	L	A	C	V	D	E	I	A	R	G	C	E	T	K	P	I	T	G	L	A
Query Conservation														.	.
Alig confidence														.	.																																									.	.																			.
Template Conservation																																																								.	.																			.
Template Sequence		Q	A	Q	E	F	Y	S	S	H	G	L	T	D	T	D	I	L	I	G	F	N	I	G	S	A	V	P	E	K	R	W	P	A	E	R	F	A	H	V	A	D	Y	F	G	R	L	G	Y	K	T	V	F	F	G	.	.	G	P	X	D	L	E	X	V	Q	P	V	V	E	Q	X	E	T	K	.	P	I	V	A	T
Template Known Secondary structure									T	T	T			T	T											S	S	G	G	G																	T	T								.	.		G	G	G										T		S	S		.					T
Template Predicted Secondary structure																																																								.	.																			.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		G	K	T	R	F	P	E	L	G	A	L	I	D	H	A	V	L	F	I	G	V	D	S	A	P	G	H	I	A	A	A	V	K	T	P	V	I	S	L	F	G	A	T	D	H	V	F	W	R	P	W	T	E	N	I	I	Q	F	W	A	G	N	Y	Q	K	M	P	T	R	H	.	E	L	D	R	N	K	K	Y	L
Query Conservation																																																																								.
Alig confidence																																																														.										.
Template Conservation																																																														.
Template Sequence		G	K	F	Q	L	G	P	L	A	A	A	X	N	R	C	N	L	L	I	T	N	D	S	G	P	X	H	V	G	I	S	Q	G	V	P	I	V	A	L	Y	G	P	S	N	P	F	F	Y	G	P	Y	Q	A	H	A	I	V	L	E	T	.	X	D	S	Y	E	S	X	K	K	I	I	K	E	G	N	Y	K	G	L
Template Known Secondary structure		T															S						S	S									T	T									S	S						S			S	S	S						S	.		S											T					T	T
Template Predicted Secondary structure																																																														.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	I	P	A	E	D	V	I	A	A	T	E	K	L	L	P	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	I	S	E	E	Q	V	I	K	A	A	E	T	L	L	L	E	S
Template Known Secondary structure		T	T	S
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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