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Job DescriptionP25742
Confidence97.26%DateThu Jan 5 11:42:29 GMT 2012
Rank23Aligned Residues119
% Identity11%Templatec3pe3D_
PDB info PDB header:transferaseChain: D: PDB Molecule:udp-n-acetylglucosamine--peptide n- PDBTitle: structure of human o-glcnac transferase and its complex with a peptide2 substrate
Resolution2.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   165....170.........180.........190.........200.........210.........220......... 230.........240...
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Query Sequence  DALGVKDHYVVIQPTARQIFKCWDNDKFSKVIDALQQRGYQVVLTCGPSADDLACVDEIARGCET. KPITGLAGKTRFPE
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Template Sequence  SQYGLPEDAIVYCNFNQLY. . KIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEE
Template Known Secondary structure  TTTT

TTS

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GG..G

SSSTTTTTT

GGG


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   823......830.........840. ........850.........860.........870.........880.........890.........900
 
   244.....250....... ..260.... .....270.........280.....
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Query Sequence  LGALIDHAVLFIGV. . . DSAPGHI. AAAVKTPVISLFGATDHVFWR
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Template Sequence  HVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVA
Template Known Secondary structure  GGGG
S

SSS

STT

B


SSGGGT
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   901........910.........920.........930.........940......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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