Job Description P25742 Confidence 62.72% Date Thu Jan 5 11:42:29 GMT 2012 Rank 64 Aligned Residues 194 % Identity 13% Template c3pdiG_ PDB info PDB header:protein binding Chain: G: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nife; PDBTitle: precursor bound nifen Resolution 2.40 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.							110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																													.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.
Query Sequence		L	I	K	T	L	R	A	N	N	Y	D	L	V	I	N	L	T	D	Q	W	M	V	A	L	L	V	R	C	L	P	A	R	M	K	I	S	Q	L	Y	G	H	R	Q	.	.	.	.	.	.	H	G	I	W	K	K	S	F	T	H	L	A	P	I	H	G	T	H	I	V	E	R	N	L	S	V	L	E	P	L	G
Query Conservation																																													.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	P	L	L	D	E	L	G	L	R	V	L	C	T	L	A	G	D	A	R	Y	R	E	V	Q	T	M	H	R	A	E	V	N	M	M	V	C	S	K	A	M	L	N	V	A	R	K	L	Q	E	T	Y	G	T	P	W	F	E	G	S	F	Y	G	I	T	D	T	S	Q	A	L	R	D	F	A	R	L	L	D
Template Known Secondary structure		T								T								T	S	S	B						T	T	G	G	G		S						S			T	T																				S	S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		I	T	D	F	Y	T	D	T	T	M	S	Y	A	E	D	C	W	K	K	M	R	R	E	L	D	.	A	L	G	V	K	D	H	Y	V	V	I	Q	P	T	A	R	Q	I	F	K	C	W	D	N	D	K	F	S	K	V	I	D	A	L	Q	Q	R	G	Y	Q	V	V	L	T	C	G	P	S	A	D	D	L	A	C
Query Conservation																											.
Alig confidence																											.																				.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.
Template Sequence		D	P	D	L	T	A	R	T	E	A	L	I	A	R	E	E	A	K	V	R	A	A	L	E	P	W	R	A	R	L	E	G	K	R	V	L	L	Y	T	G	G	V	K	S	W	.	.	.	.	.	.	.	.	.	S	V	V	S	A	L	Q	D	L	G	M	K	V	V	A	T	G	T	K	K	S	T	E	E	D	K
Template Known Secondary structure																																T	T								S	S	S				.	.	.	.	.	.	.	.	.										T								B	S	S	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.										.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		V	D	E	I	A	R	G	C	E	T	K	P	I	T	G	L	A	G	K	T	R	F	P	E	L	G	A	L	I	D	.	.	H	A	V	L	F	I	G	V	D	S	A	P	G	H	I	A	A	A	V	K	T	P	V	I
Query Conservation																																.	.
Alig confidence																.	.	.														.	.									.
Template Conservation																.	.	.																								.
Template Sequence		A	R	I	R	E	L	M	G	D	D	V	K	M	L	.	.	.	D	E	G	N	A	R	V	L	L	K	T	V	D	E	Y	Q	A	D	I	L	I	A	G	.	G	R	N	M	Y	T	A	L	K	G	R	V	P	F	L
Template Known Secondary structure								S		S	S			B		.	.	.		S		S											T	T		S						.	G	G	G							T	T			B
Template Predicted Secondary structure																.	.	.																								.
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.				.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions