Job Description P25742 Confidence 99.34% Date Thu Jan 5 11:42:29 GMT 2012 Rank 5 Aligned Residues 312 % Identity 13% Template c3ot5D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; PDBTitle: 2.2 angstrom resolution crystal structure of putative udp-n-2 acetylglucosamine 2-epimerase from listeria monocytogenes Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	M	L	L	T	T	P	V	I	S	T	L	K	Q	N	Y	P	D	A	K	I	D	M	L	L	Y	Q	D	T	I	P	I	L	S	E	N	P	E	I	N	A	L	Y	G	I	S	N	K	G	A	G	T	F	D	K	I	K	N	V	L	S	L	I	K	T	L	R	A	N	N	Y	D	L	V	I	N	L	T	D
Query Conservation
Alig confidence																																							.
Template Conservation																																							.
Template Sequence		P	E	A	I	K	M	A	P	L	V	L	A	L	E	K	E	P	E	T	F	E	S	T	V	V	I	T	A	M	L	D	Q	V	L	E	I	F	.	D	I	K	P	D	I	D	L	D	I	G	Q	T	L	A	E	I	T	S	R	V	M	N	G	I	N	E	V	I	A	A	E	N	P	D	I	V	L	V	H	G	D
Template Known Secondary structure																T		T	T	T																		T	.	T				S																														S						T	T
Template Predicted Secondary structure																																							.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.										.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.
Query Sequence		Q	W	M	V	A	L	L	V	R	C	L	P	A	R	M	K	I	S	Q	L	Y	G	H	R	Q	H	G	I	W	K	K	S	F	T	H	L	A	P	.	.	.	.	.	.	.	.	.	I	H	G	T	H	I	V	E	R	N	L	S	V	L	E	P	L	G	I	T	D	F	Y	T	D	T	T	M	S	Y	A	E	D
Query Conservation																																								.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	T	T	S	F	A	A	G	L	A	T	F	Y	Q	Q	K	M	L	G	H	V	E	A	G	L	R	T	W	N	K	Y	S	P	F	P	E	E	M	N	R	Q	L	T	G	V	M	A	D	I	H	F	S	P	T	K	Q	A	K	E	N	L	L	A	E	G	K	D	P	A	T	I	F	V	T	G	N	T	A	I	D
Template Known Secondary structure															T	T							S						S		T	T	T	T	T	T													S					S	S										T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		C	W	K	K	M	R	R	E	L	D	A	L	.	.	.	.	G	V	K	D	H	Y	V	V	I	Q	P	T	A	R	Q	I	F	K	C	W	D	N	D	K	F	S	K	V	I	D	A	L	Q	Q	R	G	Y	Q	V	V	L	T	C	G	P	S	A	D	D	L	A	C	V	D	E	I	A	R	G	C	E	T	K	P
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.
Template Conservation
Template Sequence		A	L	K	T	T	V	Q	K	D	Y	H	H	P	I	L	E	N	L	G	D	N	R	L	I	L	M	T	A	H	R	R	E	N	L	G	E	P	M	Q	G	M	F	E	A	V	R	E	I	V	E	S	R	E	D	T	E	L	V	Y	P	M	H	L	N	P	A	V	R	E	K	A	M	A	I	L	G	G	H	E	R
Template Known Secondary structure		T					S		T	T								S		T	T															S	T																	T	T									S													T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	G	L	A	G	K	T	R	F	P	E	L	G	A	L	I	D	H	A	V	L	F	I	G	V	D	S	A	P	G	H	I	A	A	A	V	K	T	P	V	I	S	L	F	G	A	T	D	H	V	F	W	R	P	W	T	E	N	I	I	Q	F	W	A	G	N	Y	Q	K	M	P	T	R	H	E	L	D	R	N
Query Conservation
Alig confidence				.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	H	.	L	I	E	P	L	D	A	I	D	F	H	N	F	L	R	K	S	Y	L	V	F	T	D	S	G	G	V	Q	E	E	A	P	G	M	G	V	P	V	L	V	L	R	D	T	T	E	R	P	E	G	I	E	A	G	T	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.																															G	G	G	G	T								S	S		S							T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	Y	L	S	V	I	P	A	E	D	V	I	A	A	T	E	K	L	L	P	E	D	A	P	S	A	D	R	N
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	L	I	G	T	N	K	E	N	L	I	K	E	A	L	D	L	L	D	N	K	E	S	H	D	K	M	A
Template Known Secondary structure		.	.	.				S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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