Job Description P25742 Confidence 98.63% Date Thu Jan 5 11:42:29 GMT 2012 Rank 9 Aligned Residues 315 % Identity 12% Template c3dzcA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; PDBTitle: 2.35 angstrom resolution structure of wecb (vc0917), a udp-n-2 acetylglucosamine 2-epimerase from vibrio cholerae. Resolution 2.35 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.																																	.
Query SS confidence																															.	.	.	.																																	.
Query Sequence		G	D	M	L	L	T	T	P	V	I	S	T	L	K	Q	N	Y	P	D	A	K	I	D	M	L	L	Y	Q	D	.	.	.	.	T	I	P	I	L	S	E	N	P	E	I	N	A	L	Y	G	I	S	N	K	G	A	G	T	F	D	K	I	K	N	V	L	.	S	L	I	K	T	L	R	A	N	N	Y	D	L	V
Query Conservation																															.	.	.	.																																	.
Alig confidence																															.	.	.	.																																	.
Template Conservation
Template Sequence		P	E	A	I	K	M	A	P	L	V	Q	Q	L	C	Q	D	N	R	F	V	A	K	V	C	V	T	G	Q	H	R	E	M	L	D	Q	V	L	E	L	F	S	I	T	P	D	F	D	L	N	I	M	E	P	G	Q	T	L	N	G	V	T	S	K	I	L	L	G	M	Q	Q	V	L	S	S	E	Q	P	D	V	V
Template Known Secondary structure																		T	T										S	S	S										T	T				S								T	T																								S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120										.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.
Query Sequence		I	N	L	T	D	Q	W	M	V	A	L	L	V	R	C	L	P	A	R	M	K	I	S	Q	L	Y	G	H	R	Q	H	G	I	W	K	K	S	F	T	H	L	.	.	.	.	.	.	.	.	.	A	P	I	H	G	T	H	I	V	E	R	N	L	S	V	L	E	P	L	G	I	T	D	F	Y	T	D	T	T	M
Query Conservation																																											.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	H	G	D	T	A	T	T	F	A	A	S	L	A	A	Y	Y	Q	Q	I	P	V	G	H	V	E	A	G	L	R	T	G	N	I	Y	S	P	W	P	E	E	G	N	R	K	L	T	A	A	L	T	Q	Y	H	F	A	P	T	D	T	S	R	A	N	L	L	Q	E	N	Y	N	A	E	N	I	F	V	T	G
Template Known Secondary structure					T	T	S												T	T	T							T						S		T	T	S	S	T	T											T		S					S	S										T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.														.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Y	A	E	D	C	W	K	K	M	R	R	E	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	G	V	K	D	H	Y	V	V	I	Q	P	T	A	R	Q	I	F	K	C	W	D	N	D	K	F	S	K	V	I	D	A	L	Q	Q	R	G	Y	Q	V	V	L	T	C	G	P	S	A	D	D	L
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	T	V	I	D	A	L	L	A	V	R	E	K	I	H	T	D	M	D	L	Q	A	T	L	E	S	Q	F	P	M	L	D	A	S	K	K	L	I	L	V	T	G	H	R	R	E	S	F	G	G	G	F	E	R	I	C	Q	A	L	I	T	T	A	E	Q	H	P	E	C	Q	I	L	Y	P	V	H	L	N	P	N
Template Known Secondary structure																												T		T	T			T	T	S								S		B				T	T																	T	T									B
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	V	D	E	I	A	R	G	C	E	T	K	P	I	T	G	L	A	G	K	T	R	F	P	E	L	G	A	L	I	D	H	A	V	L	F	I	G	V	D	S	A	P	G	H	I	A	A	A	V	K	T	P	V	I	S	L	F	G	A	T	D	H	V	F	W	R	P	W	T	E	N	I	I	Q	F	W	A	G
Query Conservation
Alig confidence																		.																																																										.	.	.	.	.	.
Template Conservation																		.																																																										.	.	.	.	.	.
Template Sequence		V	R	E	P	V	N	K	L	L	K	G	V	S	N	I	V	.	L	I	E	P	Q	Q	Y	L	P	F	V	Y	L	M	D	R	A	H	I	I	L	T	D	S	G	G	I	Q	E	E	A	P	S	L	G	K	P	V	L	V	M	R	E	T	T	E	R	P	E	A	V	A	A	G	T	V	K	.	.	.	.	.	.
Template Known Secondary structure										T	T	T		T	T			.																		S					S		S	G	G	G	T	T	G	G	G	G	T								S	S		S								T	S			.	.	.	.	.	.
Template Predicted Secondary structure																		.																																																										.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	Q	K	M	P	T	R	H	E	L	D	R	N	K	K	Y	L	S	V	I	P	A	E	D	V	I	A	A	T	E	K	L	L	P	E	D	A	P	S	A	D	R	N	A	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	G	T	N	Q	Q	Q	I	C	D	A	L	S	L	L	L	T	D	P	Q	A	Y	Q	A	M	S	Q	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T																								T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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