Job Description P25742 Confidence 97.71% Date Thu Jan 5 11:42:29 GMT 2012 Rank 16 Aligned Residues 308 % Identity 13% Template c3c4vB_ PDB info PDB header:transferase Chain: B: PDB Molecule:predicted glycosyltransferases; PDBTitle: structure of the retaining glycosyltransferase msha:the2 first step in mycothiol biosynthesis. organism:3 corynebacterium glutamicum : complex with udp and 1l-ins-1-4 p. Resolution 2.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.												.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	M	L	L	T	T	P	V	I	S	T	L	K	Q	N	Y	P	D	A	K	I	D	M	L	L	Y	Q	D	T	I	P	I	L	S	E	N	P	E	I	N	A	L	Y	G	I	S	.	.	.	.	.	.	.	.	.	.	.	N	K	G	A	G	T	F	D	K	I	K	N	V	L	S	L	I	K	T	L	R	A
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.
Template Sequence		G	M	N	V	Y	I	L	S	T	A	T	E	L	A	K	Q	.	.	G	I	E	V	D	I	Y	T	R	A	T	R	P	S	Q	G	E	I	V	R	V	A	E	N	L	R	V	I	N	I	A	A	G	P	Y	E	G	L	S	K	E	E	L	P	T	Q	L	A	A	F	T	G	G	M	L	S	F	T	R	R	E	K
Template Known Secondary structure																	T	.	.	T												G	G	G		S						T	T									S		S	S	S			T	T	T	G	G	G	G															T	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		74	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.												.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure													.	.																													.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Query SS confidence													.	.																													.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Query Sequence		N	N	Y	D	L	V	I	N	L	T	D	.	.	Q	W	M	V	A	L	L	V	R	C	L	P	A	R	M	K	I	S	Q	L	Y	G	H	R	Q	H	G	I	.	.	.	.	.	.	.	.	.	.	.	W	K	K	S	F	T	H	L	A	P	I	H	G	T	H	I	V	E	R	N	L	S	V	L	.	.	.	.
Query Conservation													.	.																													.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Alig confidence													.	.																													.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation
Template Sequence		V	T	Y	D	L	I	H	S	H	Y	W	L	S	G	Q	V	G	W	L	L	R	D	L	W	R	I	P	L	I	H	T	A	H	T	L	A	A	V	S	D	T	P	E	S	E	A	R	R	I	C	E	Q	Q	L	V	D	N	A	D	V	L	A	V	N	T	Q	E	E	M	Q	D	L	M	H	H	Y	D	A	D	P
Template Known Secondary structure					S																					T								S	S		S																							S					S	S															G
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	L	G	I	T	D	F	Y	T	D	T	T	M	S	Y	A	E	D	C	W	K	K	M	R	R	E	L	D	A	L	G	V	K	D	H	Y	V	V	I	Q	P	T	A	R	Q	I	F	K	C	W	D	N	D	K	F	S	K	V	I	D	A	L	Q	Q	R	G	Y	Q	V	V	L	T	C	G	P	S	A	D	D
Query Conservation
Alig confidence																																																				.	.
Template Conservation																																																				.	.
Template Sequence		D	R	I	S	V	V	S	P	G	A	D	V	E	L	Y	S	P	G	N	D	R	A	T	E	R	S	R	R	E	L	G	I	P	L	H	T	K	V	V	A	F	V	G	R	L	Q	P	F	K	G	.	.	P	Q	V	L	I	K	A	V	A	A	L	F	D	R	D	P	D	R	N	L	R	V	I	I	C	G	G	P
Template Known Secondary structure		G	G								B		T	T	T	S				S	T	T									T	T			S	S	S							S			S	G	G	G		.	.																T	T
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.						.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		L	A	C	V	D	E	I	A	R	G	C	E	T	K	P	I	T	G	L	A	G	K	T	R	F	P	E	L	G	A	L	I	D	H	A	V	L	F	I	G	V	D	.	.	.	.	.	S	A	P	G	H	I	A	A	A	V	K	T	P	V	I	S	L	F	G	A	T	D	H	V	F	W	R	P	W	T	E	N	I
Query Conservation																																												.	.	.	.	.
Alig confidence			.	.	.																																							.	.	.	.	.																												.
Template Conservation			.	.	.																																																																							.
Template Sequence		Y	.	.	.	R	H	M	A	E	E	L	G	V	E	K	R	I	R	F	L	D	P	R	P	P	S	E	L	V	A	V	Y	R	A	A	D	I	V	A	V	P	S	F	N	E	S	F	G	L	V	A	M	E	A	Q	A	S	G	T	P	V	I	A	A	R	V	G	G	L	P	I	A	V	A	.	E	G	E	T	G
Template Known Secondary structure			.	.	.								T		G	G	G																				S							S	S		S	S										T	T							S		T	T					S		.	B	T	T	T
Template Predicted Secondary structure			.	.	.																																																																							.
Template SS confidence
		275				.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	F	W	A	G	N	Y	Q	K	M	P	T	R	H	E	L	D	R	N	K	K	Y	L	S	V	I	P	A	E	D	V	I	A	A	T	E	K	L	L	P	E	D	A	P	S	A	D	R	N
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	V	D	G	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	A	W	A	D	A	L	A	T	L	L	D	D	D	E	T	R	I	R	M	G
Template Known Secondary structure					S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		351	.	.	.	.	.	.																						.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions