Job Description P25742 Confidence 25.12% Date Thu Jan 5 11:42:29 GMT 2012 Rank 92 Aligned Residues 211 % Identity 15% Template c3aerB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:light-independent protochlorophyllide reductase subunit b; PDBTitle: structure of the light-independent protochlorophyllide reductase2 catalyzing a key reduction for greening in the dark Resolution 2.80 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.							.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																																									.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.
Query Sequence		F	D	K	I	K	N	V	L	S	L	I	K	T	L	R	A	N	N	Y	D	L	V	I	N	L	T	D	Q	W	M	V	A	L	L	V	R	C	L	P	A	R	M	K	I	S	Q	L	Y	G	H	R	Q	H	G	I	.	.	.	.	.	.	W	K	K	S	F	T	H	L	A	P	I	H	G	T	H	I	V	E	R
Query Conservation																																																									.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	H	R	D	D	V	A	E	V	T	K	L	L	A	T	M	G	I	K	V	N	V	C	A	P	L	G	A	S	P	D	D	L	R	K	L	G	Q	A	H	F	N	V	L	M	Y	P	E	T	G	E	S	A	A	R	H	L	E	R	A	C	K	Q	P	F	T	K	I	V	P	I	G	V	G	A	T	R	D	F
Template Known Secondary structure		T	T														T	T	T									T	T							T	T	G	G	G	S	S																									B							S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		N	L	S	V	L	E	P	L	G	I	T	D	F	Y	T	D	T	T	M	S	Y	A	E	D	C	W	K	K	M	R	R	E	L	D	A	L	G	V	K	D	H	Y	V	V	I	Q	P	T	A	R	Q	I	F	K	C	W	D	N	D	K	F	S	K	V	I	D	A	L	Q	.	Q	R	G	Y	Q	V	V	L	T	C
Query Conservation																																																																							.
Alig confidence																	.	.	.	.	.																													.	.	.	.	.	.	.	.	.													.
Template Conservation																	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Sequence		L	A	E	V	S	K	I	T	G	L	P	V	V	T	D	.	.	.	.	.	E	S	T	L	R	Q	P	W	W	S	A	S	V	D	S	T	Y	L	T	G	K	R	V	F	I	F	G	D	.	.	.	.	.	.	.	.	.	G	T	H	V	I	A	A	A	R	I	A	A	K	E	V	G	F	E	V	V	G	M	G
Template Known Secondary structure																	.	.	.	.	.		T	T									S	G	G	G	G	G	G	T	T							S	S	.	.	.	.	.	.	.	.	.														T	T
Template Predicted Secondary structure																	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260						.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.										.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																										.	.																																				.	.	.
Query SS confidence																																										.	.																																				.	.	.
Query Sequence		G	P	S	A	D	D	L	A	C	V	D	E	I	A	R	G	C	E	T	K	P	I	T	G	L	A	G	K	T	R	F	P	E	L	G	A	L	I	D	H	.	.	A	V	L	F	I	G	V	D	S	A	P	G	H	I	A	A	A	V	K	T	P	V	I	S	L	F	G	A	T	D	H	V	F	W	R	.	.	.
Query Conservation																																										.	.																																				.	.	.
Alig confidence																									.	.	.	.														.	.								.																												.	.	.
Template Conservation																									.	.	.	.																							.
Template Sequence		C	Y	N	R	E	M	A	R	P	L	R	T	A	A	A	E	Y	G	L	E	A	L	I	.	.	.	.	T	D	D	Y	L	E	V	E	K	A	I	E	A	A	A	P	E	L	I	L	G	T	.	Q	M	E	R	N	I	A	K	K	L	G	L	P	C	A	V	I	S	A	P	V	H	V	Q	D	F	P	A	R	Y
Template Known Secondary structure			S		G	G	G										T	T	T						.	.	.	.		S															S						.										T	T							S		S			S	T	T	S		S	S
Template Predicted Secondary structure																									.	.	.	.																							.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.					.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
			286	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	P	W
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	P	Q
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		387	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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