Job Description P25742 Confidence 97.59% Date Thu Jan 5 11:42:29 GMT 2012 Rank 18 Aligned Residues 266 % Identity 11% Template c2x6rA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:trehalose-synthase tret; PDBTitle: crystal structure of trehalose synthase tret from p.2 horikoshi produced by soaking in trehalose Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																						.	.	.	.
Query SS confidence																																																																						.	.	.	.
Query Sequence		G	D	M	L	L	T	T	P	V	I	S	T	L	K	Q	N	Y	P	D	A	K	I	D	M	L	L	Y	Q	D	T	I	P	I	L	S	E	N	P	E	I	N	A	L	Y	G	I	S	N	K	G	A	G	T	F	D	K	I	K	N	V	L	S	L	I	K	T	L	R	.	.	.	.	A	N	N	Y	D	L	V	I
Query Conservation																																																																						.	.	.	.
Alig confidence																		.	.																																																			.	.	.	.
Template Conservation																		.	.
Template Sequence		G	V	A	E	I	L	H	S	L	V	P	L	L	R	S	I	.	.	G	I	E	A	R	W	F	V	I	E	G	P	T	E	F	F	N	V	T	K	T	F	H	N	A	L	Q	G	N	E	S	L	K	L	T	E	E	M	K	E	L	Y	L	N	V	N	R	E	N	S	K	F	I	D	L	S	S	F	D	Y	V	L
Template Known Secondary structure		T														T	T	.	.	T																											T		S	S																			T	T	S	S		G	G	G	S	S
Template Predicted Secondary structure																		.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120								.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.
Query Sequence		N	L	T	D	Q	W	M	V	A	L	L	V	R	C	L	P	A	R	M	K	I	S	Q	L	Y	G	H	R	Q	H	G	I	W	K	K	S	F	T	H	L	.	.	.	.	.	.	.	A	P	I	H	G	T	H	I	V	E	R	N	L	S	V	L	E	P	L	G	I	T	D	F	Y	T	D	T	T	M	S	Y	A
Query Conservation																																										.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	H	D	P	Q	P	A	A	L	I	E	F	Y	E	K	K	S	P	W	L	W	R	C	H	I	D	L	S	S	P	N	R	E	F	W	E	F	L	R	R	F	V	E	K	Y	D	R	Y	I	F	H	L	P	E	Y	V	Q	P	E	L	D	R	N	K	A	V	I	M	P	P	S	I	D	P	L	S	E	K	N	V
Template Known Secondary structure				S	S	T	T	G	G	G	G	G	G	S				S								S			S	S														T	T	S	S					S	S	G	G	G	S		T	T	S		T	T	T								B		T	T	S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																			.																																													.	.	.	.	.	.
Query SS confidence																			.																																													.	.	.	.	.	.
Query Sequence		E	D	C	W	K	K	M	R	R	E	L	D	A	L	G	V	K	.	D	H	Y	V	V	I	Q	P	T	A	R	Q	I	F	K	C	W	D	N	D	K	F	S	K	V	I	D	A	L	Q	Q	R	G	Y	Q	V	V	L	T	C	G	P	S	A	.	.	.	.	.	.	D	D	L	A	C	V	D	E	I	A	R	G
Query Conservation																			.																																													.	.	.	.	.	.
Alig confidence																			.																	.	.																											.	.	.	.	.	.
Template Conservation																																				.	.
Template Sequence		E	L	K	Q	T	E	I	L	R	I	L	E	R	F	D	V	D	P	E	K	P	I	I	T	Q	V	S	R	F	D	P	W	K	G	.	.	I	F	D	V	I	E	I	Y	R	K	V	K	E	K	I	P	G	V	Q	L	L	L	V	G	V	M	A	H	D	D	P	E	G	W	I	Y	F	E	K	T	L	R	K	I
Template Known Secondary structure															T	T			T	T	S										S	T	T	S		.	.													T	T		T	T											T	T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure												.	.																								.	.	.	.	.
Query SS confidence												.	.																								.	.	.	.	.
Query Sequence		C	E	T	K	P	I	T	G	L	A	.	.	G	K	T	R	F	P	E	L	G	A	L	I	D	H	A	V	L	F	I	G	V	D	S	.	.	.	.	.	A	P	G	H	I	A	A	A	V	K	T	P	V	I	S
Query Conservation												.	.																								.	.	.	.	.
Alig confidence												.	.																								.	.	.	.	.
Template Conservation
Template Sequence		G	E	D	Y	D	V	K	V	L	T	N	L	I	G	V	H	A	R	E	V	N	A	F	Q	R	A	S	D	V	I	L	Q	M	S	I	R	E	G	F	G	L	T	V	T	E	A	M	W	K	G	K	P	V	I	G
Template Known Secondary structure		T	T		T	T						G	G	G	T														S							S	S		S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions