Job Description P25742 Confidence 100.00% Date Thu Jan 5 11:42:29 GMT 2012 Rank 3 Aligned Residues 292 % Identity 20% Template c2h1fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:lipopolysaccharide heptosyltransferase-1; PDBTitle: e. coli heptosyltransferase waac with adp Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	Y	H	G	D	M	L	L	T	T	P	V	I	S	T	L	K	Q	N	Y	P	D	A	K	I	D	M	L	L	Y	Q	D	T	I	P	I	L	S	E	N	P	E	I	N	A	L	Y	G	I	S	N	K	G	A	G	T	F	D	K	I	K	N	V	L	S	L	I	K	T	L	R	A	N	N	Y	D	L	V	I
Query Conservation
Alig confidence																																																					.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.
Template Sequence		T	S	S	M	G	D	V	L	H	T	L	P	A	L	T	D	A	Q	Q	A	I	P	G	I	K	F	D	W	V	V	E	E	G	F	A	Q	I	P	S	W	H	A	A	V	E	R	V	I	P	V	A	.	.	.	.	.	.	I	R	R	W	R	K	R	K	A	F	R	E	A	L	Q	A	K	N	Y	D	A	V	I
Template Known Secondary structure			S							T	T											S	T	T									G	G	G	T	T	G	G	G	G	S	T	T									.	.	.	.	.	.					T										T	S	S	B		S
Template Predicted Secondary structure																																																					.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.																.
Query SS confidence																																												.																.
Query Sequence		N	L	T	D	Q	W	M	V	A	L	L	V	R	C	L	P	A	R	M	K	I	S	Q	L	Y	G	H	R	Q	H	G	I	W	K	K	S	F	T	H	L	A	P	.	I	H	G	T	H	I	V	E	R	N	L	S	V	L	E	.	P	L	G	I	T	D	F	Y	T	D	T	T	M	S	Y	A	E	D	C	W	K
Query Conservation																																												.																.
Alig confidence																																												.																.																		.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		D	A	Q	G	L	V	K	S	A	A	L	V	T	R	L	A	H	G	V	K	H	G	M	D	W	Q	T	A	R	E	P	L	A	S	L	F	Y	N	R	K	H	H	I	A	K	Q	Q	H	A	V	E	R	T	R	E	L	F	A	K	S	L	G	Y	S	K	P	Q	T	Q	G	D	Y	A	I	A	Q	.	.	.	.
Template Known Secondary structure				S									T	G	G	G	S	B	S							T	T	T	S	S	S	G	G	G	G	G	G		S							S	S	S															T	S				S	S							T		.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	R	R	E	L	D	A	L	G	V	K	D	H	Y	V	V	I	Q	P	T	A	R	Q	I	F	K	C	W	D	N	D	K	F	S	K	V	I	D	A	L	Q	Q	R	G	Y	Q	V	V	L	T	C	G	P	S	A	D	D	L	A	C	V	D	E	I	A	R	G	C	E	T	K	P	I	T	G	L	A	G	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																										.																							.	.	.
Template Conservation		.	.	.	.	.	.	.																																										.																							.	.	.
Template Sequence		.	.	.	.	.	.	.	H	F	L	T	N	G	E	Y	A	V	F	L	H	A	T	T	R	D	D	K	H	W	P	E	E	H	W	R	E	L	I	G	L	L	A	D	S	G	I	R	I	.	K	L	P	W	G	A	P	H	E	E	E	R	A	K	R	L	A	E	G	F	A	Y	.	.	.	V	E	V	L	P	K
Template Known Secondary structure		.	.	.	.	.	.	.				T												S	S	G	G	G	S													T	G	G	G	T				.					S	S												T	T		T	T	.	.	.						S
Template Predicted Secondary structure		.	.	.	.	.	.	.																																										.																							.	.	.
Template SS confidence
									168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	F	P	E	L	G	A	L	I	D	H	A	V	L	F	I	G	V	D	S	A	P	G	H	I	A	A	A	V	K	T	P	V	I	S	L	F	G	A	T	D	H	V	F	W	R	P	W	T	E	N	I	I	Q	F	W	A	G	N	Y	Q	K	M	P	T	R	H	E	L	D	R	N	K	K	Y	L	S	V	I
Query Conservation
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	S	L	E	G	V	A	R	V	L	A	G	A	K	F	V	V	S	V	D	T	G	L	S	H	L	T	A	A	L	D	R	P	N	I	T	V	Y	G	P	T	D	P	N	Q	M	V	C	R	A	P	G	N	E	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L
Template Known Secondary structure												T	T		S						S	S									T	T								S	S											G	G	G		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.																							.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	E	D	V	I	A	A	T	E	K	L	L	P	E	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	N	A	V	K	Q	F	I	E	E	N	A	E	K	A	A
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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