Return to main results Retrieve Phyre Job Id

Job DescriptionP25742
Confidence25.51%DateThu Jan 5 11:42:29 GMT 2012
Rank89Aligned Residues83
% Identity16%Templatec2an1D_
PDB info PDB header:transferaseChain: D: PDB Molecule:putative kinase; PDBTitle: structural genomics, the crystal structure of a putative kinase from2 salmonella typhimurim lt2
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   220.........230.........240.........250...... ...260........ .270.........280.........290....
Predicted Secondary structure 











..



...













Query SS confidence 




































. .











. . .

























Query Sequence  VDEIARGCETKPITGLAGKTRFPELGALIDHAVLFIG. . VDSAPGHIAAAV. . . KTPVISLFGATDHVFWRPWTENIIQF
Query Conservation                 
 
  

 

  

    
 
 .. 


  


 

...
 
 
 
 
        
        
Alig confidence 




































..











...






....








......
Template Conservation     
   
   

 
 
               



 





 
 
         




....
 
 



 ......
Template Sequence  HEMLYRWLCDQGYEVIVEKVPTGTLAEIGQQADLAVVVGGDGNMLGAARTLARYDINVIGI. . . . NRGNLGFLT. . . . . .
Template Known Secondary structure  TT




B


SSTTSS
....
SSS

SS
......
Template Predicted Secondary structure 






















....








......
Template SS confidence 















































































   23......30.........40.........50.........60.........70.........80... ......90..
 
   295....300.........310.........320.........330....
Predicted Secondary structure 




















Query SS confidence 







































Query Sequence  WAGNYQKMPTRHELDRNKKYLSVIPAEDVIAATEKLLPED
Query Conservation                     
   
  
 
   
  

   
Alig confidence  ......................

















Template Conservation  ......................          
  
  
 
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . DLDPDNALQQLSDVLEGR
Template Known Secondary structure  ......................
B
TTTTT
Template Predicted Secondary structure  ......................





Template SS confidence 







































   103......110.........120
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions