 |
Job Description | P0CE47 | Confidence | 97.58% | Date | Thu Jan 5 11:30:14 GMT 2012 |
Rank | 330 | Aligned Residues | 79 |
% Identity | 27% | Template | d1s0ua2 |
SCOP info | Elongation factor/aminomethyltransferase common domain
| EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
| EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
|
Resolution | 2.40 |
|
 |
  |   |
302 | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | |
|
|
|
. | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  | . | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | T | K | F | E | S | E | V | Y | I | L | S | K | D | E | G | G | R | H | T | . |
. |
. |
. |
P | F | F | K | G | Y | R | P | Q | F | Y | F | R | T | T | D | V | T | G | T | I | E | L | P | E | G | V | E | M | V | M | P | G | D | N | I | K | M | V | V | T | L | I | H | P | I | A | M | D | D | G | L | R | F | A | I |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|   |
|   |
|
|   |
|
|
|
|   |
|   |   |   |
|
|   |   |
|   |   |
|
|   |
|
|
|
|
|
|
|   |
|
|   |
|   |
|   |   |   |
|   |
| . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |   |
|
|
|
|   |   |
|   |
|
|
|
|
Template Sequence |   |
R | E | K | I | T | I | R | A | N | L | L | D | R | V | V | G | T | K | E | E | L | K | I | E | P | L | R | T | G | E | V | L | M | L | N | I | G | T | A | T | T | A | G | V | I | T | S | A | R | G | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
I | A | D | I | K | L | K | L | P | I | C | A | E | I | G | D | R | V | A | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
| S | S |
| S | S | T | T |
|
|
|
|
|
| T | T |
|  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
349 | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . |
  |
  |   |
378 | . | 380 | |
|
|
|
. | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
| . | . | . | . |
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | E | G | . |
. |
. |
. |
G | R | T | V | G | A | G | V | V |
Query Conservation |   |
|
|   | . | . | . | . |   |   |
|
|   |   |
|   |
|
Alig confidence |   |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |
|
|
|
|
|
|   |
|   |
|
Template Sequence |   |
S | R | R | V | G | S | R | W | R | L | I | G | Y | G | T | I |
Template Known Secondary structure |   |
 |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|