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Job DescriptionP0CE47
Confidence99.75%DateThu Jan 5 11:30:14 GMT 2012
Rank77Aligned Residues168
% Identity18%Templatec3md0A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:arginine/ornithine transport system atpase; PDBTitle: crystal structure of arginine/ornithine transport system2 atpase from mycobacterium tuberculosis bound to gdp (a ras-3 like gtpase superfamily protein)
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  KEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDC
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Template Sequence  LRLLPDSGNAHRVGITGVPGVGKSTAIEALGMHLIERGHR. . . . . . . . . . . . . . . . VAVLAVRMARLAVHPNAYIRPSTL
Template Known Secondary structure  GGG


S

TTSSTTT

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TSTT


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   4950.........60.........70.........80........ .90.........100.........110..
 
   83......90.. .......100.........110.........120.........130.........140..
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Query Sequence  PGHADYVKNM. . . . . . . . . . . . . . . . . . . . ITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVD
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Template Sequence  GGVTRATRETVVLLEAAGFDVILIETGQSEVAVANMVDTFVLLTLARTGDQLQGIKK. . . . . GVLELADIVVVNKADGEH
Template Known Secondary structure  TT




TT
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T.....TGGGG
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GGG
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   133......140.........150.........160.........170.........180......... 190.........200.......
 
   143......150...... ...160.........170.........180.........190.........
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Query Sequence  DEELLELVEMEVRE. LLSQYDFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSY
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Template Sequence  HKEARLAARELSAAIRLIYPREALWRPPVLTMSAVEG. . . . . . . . RGLAELWDTVERH
Template Known Secondary structure  STT
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BTTTT........BS
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   211........220.........230.........240....... ..250.........260
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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