Job Description P0CE47 Confidence 99.57% Date Thu Jan 5 11:30:14 GMT 2012 Rank 101 Aligned Residues 157 % Identity 18% Template c3lvrE_ PDB info PDB header:protein transport Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain- PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium Resolution 3.38 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	H	V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	L	A	K	T	Y	G	G	A	A	R	A	F	D	Q	I	D	N	A	P	E	E	K	A	R	G	I	T	I	N	T	S	H	V	E	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	H	A	D	Y	V
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	E	M	R	I	L	M	L	G	L	D	A	A	G	K	T	T	I	L	Y	K	L	K	L	G	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	T	I	P	T	V	G	F	N	V	E	T	V	T	Y	K	N	V	K	F	N	V	W	D	V	G	G	Q	D	K	I	R
Template Known Secondary structure												S	T	T	S	S											S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S									S	S												G	G	G	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		K	N	M	I	T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	.	.	.	.	Q	V	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D	F	P	G
Query Conservation																																					.	.	.	.
Alig confidence																																					.	.	.	.																						.	.	.	.	.
Template Conservation																																																														.	.	.	.	.
Template Sequence		P	L	W	R	H	Y	Y	T	G	T	Q	G	L	I	F	V	V	D	C	A	D	R	D	R	I	D	E	A	R	Q	E	L	H	R	I	I	N	D	R	E	M	R	D	A	I	I	L	I	F	A	N	K	Q	D	L	P	D	A	M	K	.	.	.	.	.	P	H	E	I	Q	E	K	L	G	L	T	R	I	R	D
Template Known Secondary structure		T	T	G	G	G	G	T	T	T										S	S			T	T													T	S	T	T		T	T										T	T	S	S	S				.	.	.	.	.								T	T		T	T			S
Template Predicted Secondary structure																																																														.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	T	P	I	V	R	G	S	A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L	E	L	A	G	F	L	D	S
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.
Template Sequence		R	N	W	Y	V	Q	P	S	C	A	T	S	G	.	.	.	.	.	.	.	.	D	G	L	Y	E	G	L	T	W	L	T	S
Template Known Secondary structure		S								B	T	T	T	T	.	.	.	.	.	.	.	.	B	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.									160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions