Job Description P0CE47 Confidence 99.20% Date Thu Jan 5 11:30:14 GMT 2012 Rank 158 Aligned Residues 141 % Identity 18% Template c3dpuA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rab family protein; PDBTitle: roccor domain tandem of rab family protein (roco) Resolution 2.90 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	L	A	K	T	Y	G	G	A	A	R	A	F	D	Q	I	D	N	A	P	E	E	K	A	R	G	I	T	I	N	T	S	H	V	E	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	H	A	D	Y	V	K
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	E	I	K	V	H	L	I	G	D	G	M	A	G	K	T	S	L	L	K	Q	L	I	G	G	L	N	V	V	T	K	Q	A	P	N	I	K	G	L	E	N	D	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	E	C	L	F	H	F	W	D	F	G	G	Q	E	I	M	H	A
Template Known Secondary structure										S	S	S		S	S																			G	G	G	S	G	G	G	T	T		S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T										S			T	T	T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.																		.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		N	M	I	T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	V	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	.	D	D	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D	F	P	G	D	D	T	P
Query Conservation																																																					.
Alig confidence																																									.												.													.	.	.	.	.	.	.	.	.
Template Conservation																																									.																									.	.	.	.	.	.	.	.	.
Template Sequence		S	H	Q	F	F	M	T	R	S	S	V	Y	M	L	L	L	D	S	R	T	D	S	N	K	H	Y	W	L	R	H	I	E	K	Y	G	G	K	S	P	.	V	I	V	V	M	N	K	I	D	E	N	P	S	Y	N	I	E	Q	K	K	I	N	E	R	.	.	.	.	.	.	.	.	.	F	P	A	I	E	N	R
Template Known Secondary structure		T							S	S									G	G	G	G	G	G												S	S	S			.								T	T	T		T	T												.	.	.	.	.	.	.	.	.		G	G	G	T	T
Template Predicted Secondary structure																																									.																									.	.	.	.	.	.	.	.	.
Template SS confidence
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.		.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.										.	.	590	.	.	.	.
		170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	R	G	S	A	L	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	H	R	I	S	C	V	E	S
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		595	.	.	.	.	600	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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