Job Description P0CE47 Confidence 98.15% Date Thu Jan 5 11:30:14 GMT 2012 Rank 298 Aligned Residues 174 % Identity 17% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	K	P	H	V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	L	A	K	T	Y	G	G	A	A	R	A	F	D	Q	I	D	N	A	P	E	.	.	.	.	.	.	.	E	K	A	R	G	I	T	I	N	T	S	H	V	E	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	K	A	K	A	A	T	V	L	S	K	A	V	K
Template Known Secondary structure			S	S	S										T	T	S																T	T											S																T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.													.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	H	A	D	Y	V	K	N	M	I	T	G	A	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	V	G	V	P	Y	I	I	V	F	L	N
Query Conservation		.																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																														.	.	.	.	.	.	.	.	.	.	.	.														.																					.	.
Template Conservation																																																									.																					.	.
Template Sequence		R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	G	.	L	N	M	L	P	Q	A	R	E	F	N	E	V	V	G	I	T	G	L	I	.	.	L	T
Template Known Secondary structure						T	T		S										S	S																		T	T	S	T	T			S								G	G	G	G	.	G	G	G											T							.	.
Template Predicted Secondary structure																																																									.																					.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D	F	P	G	D	D	T	P	I	V	R	G	S	A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L	E	L	A	G	F	L	D	S
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		K	L	D	G	S	A	R	G	G	C	V	V	S	V	V	E	E	L	.	.	.	.	.	.	.	.	.	.	.	.	G	I	P	V	K	F	I	G	V	G	E	A	V	.	.	E	D	L	Q	P	F	D	P	E	A	F	V	N	A	I	F	S
Template Known Secondary structure				S	S		S		T											.	.	.	.	.	.	.	.	.	.	.	.										S	S	S	G	.	.	G	G
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.													.	.	.	340	.	.	.	.	.	.	.	.	.			350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions