Job Description P0CE47 Confidence 100.00% Date Thu Jan 5 11:30:14 GMT 2012 Rank 28 Aligned Residues 250 % Identity 27% Template c2xexA_ PDB info PDB header:translation Chain: A: PDB Molecule:elongation factor g; PDBTitle: crystal structure of staphylococcus aureus elongation factor2 g Resolution 1.90 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	L	A	K	T	Y	G	G	A	A	R	A	F	D	Q	I	D	N	A	P	E	E	K	A	R	G	I	T	I	N	T	S	H	V	E	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	H	A	D	Y	V	K	N	M	I
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	I	G	I	M	A	H	I	D	A	G	K	T	T	T	T	E	R	I	L	Y	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	I	H	T	S	A	A	T	T	A	A	W	E	G	H	R	V	N	I	I	D	T	P	G	H	V	D	F	T	V	E	V	E
Template Known Secondary structure									G	G	G	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S					S							T	T												S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																								.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	V	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.
Template Sequence		R	S	L	R	V	L	D	G	A	V	T	V	L	D	A	Q	S	G	V	E	P	Q	T	E	T	V	W	R	Q	A	T	T	Y	G	V	P	.	R	I	V	F	V	N	K	M	D	K	L	G	A	N	F	E	Y	S	V	S	T	L	H	D	R	L	Q	A	N	A	A	P	I	Q	L	P	I	G	A	E	D	E	F
Template Known Secondary structure								S								T	T	T	B	S														T	T			.								T	T	S	T	T																					S							G	G	G
Template Predicted Secondary structure																																						.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
																																																		142	.	.	.	.	.	.	.	150								.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	E	E	L	L	E	L	V	.	.	.	.	.	.	.	E	M	E	V	R	E	L	L	S	Q	Y	D	F	P	G	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	I	I	D	L	V	E	M	K	C	F	K	Y	T	N	D	L	G	T	E	I	E	E	I	E	I	P	E	D	H	L	D	R	A	E	E	A	R	A	S	L	I	E	A	V	A	E	T	S	D	E	L	M	E	K	Y	L	G	D	E	E	I	S	V	S	E	L	K	E	A	I	R	Q	A	T	T	N	V	E
Template Known Secondary structure							T	T	T	T							S	S	S	S		S								G	G	G																	T	T										T	T																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	T	P	I	V	R	G	S	A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L	E	L	A	G	F	L	D	S	Y	I	P	E	P	E	R	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	P	F	L	L	P	I	E	D	V	F	S	I	S	G	R	G	T
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.
Template Sequence		F	Y	P	V	L	C	G	T	A	F	K	N	.	.	.	.	.	.	.	.	K	G	V	Q	L	M	L	D	A	V	I	D	Y	L	P	S	P	L	D	V	K	P	I	I	G	H	R	A	S	N	P	E	E	E	V	I	A	K	A	D	D	S	A	E	F	A	A	L	A	F	K	V	M	T	D	P	Y	V	G	K
Template Known Secondary structure									B	T	T	T	T	.	.	.	.	.	.	.	.	B	S												S			G	G	G	S								T	T										S		T	T	S													T	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.									.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.					.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		V	V	T	G	R	V	E	R	G	I	I	K	V	G	E	E	V	E	I	V	G	I	K	E	T	Q	K	S	T	C	T	G	V	E	M	F	R	.	.	.	.	K	L	L	D	E	G	R	A	G	E	N	V	G	V	L	L	R	G	I	K	R	E	E	I	E	R	G	Q	V	L	A	K	P	G	T	I	K	P
Query Conservation																																							.	.	.	.
Alig confidence																									.	.													.	.	.	.															.	.	.	.
Template Conservation																									.	.																															.	.	.	.
Template Sequence		L	T	F	F	R	V	Y	S	G	T	M	T	S	G	S	Y	V	K	N	S	T	K	G	.	.	K	R	E	R	V	G	R	L	L	Q	M	H	A	N	S	R	Q	E	I	D	T	V	Y	S	G	D	I	A	A	A	.	.	.	.	V	G	L	K	D	T	G	T	G	D	T	L	C	G	E	K	N	D	I	I
Template Known Secondary structure										S				T	T						T	T	T	T	.	.													S	S						S				T	T						.	.	.	.		S		S	S			T	T						T	T
Template Predicted Secondary structure																									.	.																															.	.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.			.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.					.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions