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Job DescriptionP0CE47
Confidence100.00%DateThu Jan 5 11:30:14 GMT 2012
Rank30Aligned Residues264
% Identity30%Templatec2rdo7_
PDB info PDB header:ribosomeChain: 7: PDB Molecule:elongation factor g; PDBTitle: 50s subunit with ef-g(gdpnp) and rrf bound
Resolution9.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70.........80.........90...
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Query Sequence  NVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMI
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Template Sequence  NIGISAHIDAGKTTTTERILFYTG. . . . . . . . . . . VNHKIGEVTSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVE
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   12.......20.........30..... ....40.........50.........60.........70.........80
 
   94.....100.........110.........120.........130.........140.
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Query Sequence  TGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVP. RIAFVNKMDRMGANFLKVVNQIKTRLGANPVPLQLAIGAEEHF
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S


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   101........110.........120.........130...... ...140.........150.........160.........170.........
 
   142.......150 .........160.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DDEELLELV. . . . . . . EMEVRELLSQYDFPG
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Template Sequence  TGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASEELMEKYLGGEELTEAEIKGALRQRVLNN
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   180.........190.........200.........210.........220.........230.........240.........250.........
 
   166...170.........180.........190.........200...... ...210.........220.....
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Query Sequence  DDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERA. . . . . . . . . . . . . . . . . . . . IDKPFLLPIEDVFSISGRG
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Template Sequence  EIILVTCGSAFKN. . . . . . . . KGVQAMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVG
Template Known Secondary structure  S


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   260.........270.. .......280.........290.........300.........310.........320.........330.
 
   226...230.........240.........250.........260.. .......270.........280.........290.........300.
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Query Sequence  TVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMF. . RKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKP
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Template Sequence  NLTFFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAA. . . . IGLKDVTTGDTLCDPDAPII
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   332.......340.........350.........360.........370.........380..... ....390.........400.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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