Job Description P0CE47 Confidence 99.55% Date Thu Jan 5 11:30:14 GMT 2012 Rank 106 Aligned Residues 149 % Identity 13% Template c2q3fB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:ras-related gtp-binding protein d; PDBTitle: x-ray crystal structure of putative human ras-related gtp2 binding d in complex with gmppnp Resolution 2.10 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	L	A	K	T	Y	G	G	A	A	R	A	F	D	Q	I	D	N	A	P	E	E	K	A	R	G	I	T	I	N	T	S	H	V	E	Y	D	T	P	T	R	.	H	Y	A	H	V	D	C	P	G	H	A	D	Y	V	K	N	M
Query Conservation																																																																.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	L	L	X	G	L	R	R	S	G	K	S	S	I	Q	K	V	V	F	H	K	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	N	E	T	L	F	L	E	S	T	N	K	I	C	R	E	D	V	S	N	S	S	F	V	N	F	Q	I	W	D	F	P	G	Q	I	D	F	F	D	P	T
Template Known Secondary structure								S	T	T	S	S										S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	G	G	G						S									S	S											S				T	T		T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
					93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.																																				.	.	.	.																				.	.	.
Query SS confidence		.	.	.																																				.	.	.	.																				.	.	.
Query Sequence		.	.	.	I	T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	V	G	.	.	.	.	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	.	.	.	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D
Query Conservation		.	.	.																																				.	.	.	.																				.	.	.
Alig confidence		.	.	.																																				.	.	.	.																				.	.	.
Template Conservation
Template Sequence		F	D	Y	E	X	I	F	R	G	T	G	A	L	I	F	V	I	D	S	Q	D	D	Y	X	E	A	L	A	R	L	H	L	T	V	T	R	A	Y	K	V	N	T	D	I	N	F	E	V	F	I	H	K	V	D	G	L	S	D	D	H	K	I	E	T	Q	R	D	I	H	Q	R	A	N	D	D	L	A	D	A	G
Template Known Secondary structure										T										T	T	S																					T	T										T	T	S	S																							T	T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	G	D	D	T	P	I	V	R	G	S	A	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	K	I	H	L	S	F	Y	L	T	S	I	Y	D
Template Known Secondary structure			T	T	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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