Job Description P0CE47 Confidence 98.25% Date Thu Jan 5 11:30:14 GMT 2012 Rank 289 Aligned Residues 135 % Identity 18% Template c2j7pA_ PDB info PDB header:signal recognition Chain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy Resolution 1.97 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.								.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.																		.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.																		.	.	.
Query Sequence		S	K	E	K	F	E	R	T	K	P	H	V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	L	A	K	T	Y	G	G	A	A	R	A	F	D	Q	I	D	N	A	P	.	.	.	.	.	.	.	E	E	K	A	R	G	I	T	I	N	T	S	H	V	E	Y	D	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.																		.	.	.
Alig confidence																																																							.	.	.	.	.	.	.																		.	.	.
Template Conservation
Template Sequence		G	E	A	R	L	P	V	L	K	D	R	N	L	W	F	L	V	G	L	Q	G	S	G	K	T	T	T	A	A	K	L	A	L	Y	Y	K	G	K	G	R	R	P	L	L	V	A	A	D	T	Q	R	P	A	A	R	E	Q	L	R	L	L	G	E	K	V	G	V	P	V	L	E	V	M	D	G	E	S	P	E	S
Template Known Secondary structure		S	S								S	S								S	T	T	S	S														T	T	T											S	S	T	T													T								T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
												72	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.														.	.	.	.									.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.														.	.	.	.									.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	T	P	T	R	H	Y	A	H	V	D	C	P	G	.	.	.	.	H	A	D	Y	V	K	N	M	.	.	I	T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	V	G	V	P	Y	I	I	V	F	L
Query Conservation		.	.	.	.	.	.	.	.	.	.														.	.	.	.									.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.														.	.	.	.									.	.																				.																					.	.
Template Conservation																																																										.																					.	.
Template Sequence		I	R	R	R	V	E	E	K	A	R	L	E	A	R	D	L	I	L	V	D	T	A	G	R	L	Q	I	D	E	P	L	M	G	E	L	A	R	L	K	E	V	L	G	P	D	E	V	L	L	V	L	D	A	M	T	G	.	Q	E	A	L	S	V	A	R	A	F	D	E	K	V	G	V	T	G	L	V	.	.	L
Template Known Secondary structure													T	T													T	T																		S								T	T			.	T	T												T							.	.
Template Predicted Secondary structure																																																										.																					.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.
		136	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	C	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	L	D
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions