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Job DescriptionP0CE47
Confidence97.60%DateThu Jan 5 11:30:14 GMT 2012
Rank329Aligned Residues147
% Identity17%Templatec2j1lA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:rho-related gtp-binding protein rhod; PDBTitle: crystal structure of human rho-related gtp-binding protein2 rhod
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  PHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVK
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Template Sequence  RSVKVVLVGDGGCGKTSLLMVFAD. . . . . . . . . . . . . . . . . . . . . . . . . TPTVFERYMVNLQVKGKPVHLHIWD. . . . . .
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   16...20.........30......... 40.........50.........60....
 
   91........100.........110.........120...... ...130.........140.........150.... .....160..
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Query Sequence  NMITGAAQMDGAILVVAATDGPMPQTREHILLGRQV. . . GVPYIIVFLNKCDMVDDEELLELVEMEV. . . . . RELLSQYD
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Template Sequence  . . . . . . TDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLRKDKSLVNKLRRNGLEPVTYHRGQEMA
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   72.......80.........90.........100.........110.........120.........130.........140.....
 
   163......170.........180.........190....
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Query Sequence  FPGDDTPIVRGSALKALEGDAEWEAKILELAG
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Template Sequence  RSVGAVAYLECSARLHDNVHAVFQEAAEVALS
Template Known Secondary structure  TT
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BTTTTBS
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   161........170.........180.........190..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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