Job Description P0CE47 Confidence 99.00% Date Thu Jan 5 11:30:14 GMT 2012 Rank 190 Aligned Residues 161 % Identity 20% Template c2fg5A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ras-related protein rab-31; PDBTitle: crystal structure of human rab31 in complex with a gtp2 analogue Resolution 2.80 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	L	A	K	T	Y	G	G	A	A	R	A	F	D	Q	I	D	N	A	P	E	E	K	A	R	G	I	T	I	N	T	S	H	V	E	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	H	A	D	Y	V	K
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	L	K	V	C	L	L	G	D	T	G	V	G	K	S	S	I	V	C	R	F	V	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	F	D	H	N	I	S	P	T	I	G	A	S	F	M	T	K	T	V	P	C	G	N	E	L	H	K	F	L	I	W	D	T	A	G	Q	E	R	F	H	S
Template Known Secondary structure												T	T	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T					S	S											S	S	S												S	G	G	G	G	G
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.															.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		N	M	I	T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	V	.	.	.	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D	F	P	G	D	D
Query Conservation																																						.	.	.
Alig confidence																																						.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.
Template Sequence		L	A	P	M	Y	Y	R	G	S	A	A	A	V	I	V	Y	D	I	T	K	Q	D	S	F	Y	T	L	K	K	W	V	K	E	L	K	E	H	G	P	E	N	I	V	M	A	I	A	G	N	K	C	D	L	S	D	I	R	E	V	P	L	K	D	A	K	E	Y	A	E	S	I	.	.	.	.	.	.	.	.	G
Template Known Secondary structure		G	T					T	T		S								T	T		T																	S		T	T										G	G	G	G	G	G			S											T	T	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140									.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	I	V	R	G	S	A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L	E	L	A	G	F	L	D	S	Y	I	P
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.
Template Sequence		A	I	V	V	E	T	S	A	K	N	A	.	.	.	.	.	.	.	.	I	N	I	E	E	L	F	Q	G	I	S	R	Q	I	P
Template Known Secondary structure								B	T	T	T	T	.	.	.	.	.	.	.	.	B	S											T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.									.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions