Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8D3
Confidence86.91%DateThu Jan 5 11:07:33 GMT 2012
Rank2Aligned Residues99
% Identity14%Templated2gx8a1
SCOP infoNIF3 (NGG1p interacting factor 3)-like NIF3 (NGG1p interacting factor 3)-like NIF3 (NGG1p interacting factor 3)-like
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60........ .70........ .80.......
Predicted Secondary structure 




















.


..


Query SS confidence 

























































.









. .








Query Sequence  PNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNEIVRQCEAG. DLVITADIPL. . AAEAIEKGA
Query Conservation 
 


  
   
 
  
 
  


          
  
 
  
 



  

     
.









..

  
 


Alig confidence 






















.....

















..









.









..








Template Conservation 
  
  
   

  
    

  .....
     
  


  


 ..  
  
   



 



 
 
   

   

Template Sequence  EMTLGQFAEHVKQSLDVKGARVV. . . . . GKLDDKVRKVAVLGGDGN. . KYINQAKFKGADVYVTGDMYYHVAHDAMMLGL
Template Known Secondary structure  TT
S

.....S
TTS
G..GGTT
S


T
Template Predicted Secondary structure 






.....







..










Template SS confidence 















































































   254.....260.........270...... ...280.........290.... .....300.........310.........320......
 
   88.90.........100.........110.........
Predicted Secondary structure 







Query SS confidence 































Query Sequence  AALNPRGERYTPATIRERLTMRDFMDTLRASG
Query Conservation   

  

  

  

   
  
     

  
Alig confidence 



.


.
.




















Template Conservation   


. 

. .

      
   
   
    
Template Sequence  NIVD. PGH. N. VEKVMKQGVQKQLQEKVDAKK
Template Known Secondary structure  .

G.G.GGGTT
Template Predicted Secondary structure  .

.
.

Template SS confidence 































   327..330 ... . .....340.........350.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions