|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
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. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
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60 | . | . | . | . | . | . | . | |
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. | . | 70 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  | . | . |  |  |  |  |  |
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|  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |
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|
| . | . |
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|  |  |  |  |
Query SS confidence |   |
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| . |
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| . |
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. |
. |
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| . |
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Query Sequence |   |
T | I | W | V | D | A | D | A | C | P | N | V | I | K | E | I | L | Y | R | A | A | E | R | M | Q | M | P | L | V | L | V | A | N | Q | S | L | R | V | P | P | S | R | F | I | . |
. |
R | T | L | R | V | A | A | G | F | D | V | A | D | N | . |
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E | I | V | R | Q | C | E | A | . |
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G | D | L | V | I | T |
Query Conservation |   |
  |
|   |
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|   |
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|   |   |   |
|   |
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|   |
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|   |   |   |   |   |   |   |   |   |   |
| . | . |   |   |
|   |
|   |   |
|   |
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|   | . | . | . | . |   |
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|   |   |   |   |   | . | . |
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Alig confidence |   |
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| . |
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| . | . |
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| . | . |
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| . | . | . | . |
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| . | . |
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Template Conservation |   |
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| . |   |   |   |
|   | . | . |   |
|   |   |
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|   |   |   |
|   |   |
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|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |
|   |
|   |
|
Template Sequence |   |
K | V | L | I | . |
A | N | R | G | E | . |
. |
I | A | V | R | I | I | R | A | C | R | D | L | G | I | Q | T | V | A | I | Y | S | E | G | D | K | D | A | L | H | T | Q | I | A | D | E | A | Y | C | V | G | P | T | L | S | K | D | S | Y | L | N | I | P | N | I | L | S | I | A | T | S | T | G | C | D | G | V | H | P |
Template Known Secondary structure |   |
 |  |  |  | . |
|
|
|  |  | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  | G | G | G | T | T |
|  |  |  |  |  | S | S |  |  |  |  |  |  |
| S | S | G | G | G | T | T | T |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  | . |  |
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|  | . | . |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
Template SS confidence |   |
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  |   |
3 | . | . | . | |
. | . | . | 10 | . | |
|
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
74 | |
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. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
|
|
. | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Predicted Secondary structure |   |
| . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
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|  |  |  |
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|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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| . | . | . |
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|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
| . |
. |
. |
. |
. |
. |
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| . |
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Query Sequence |   |
A | . |
. |
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D | I | P | L | A | A | E | A | I | E | K | G | A | A | A | L | N | P | R | G | E | R | Y | T | P | A | T | I | R | E | R | L | T | M | R | D | F | M | D | T | L | R | A | S | G | I | Q | T | G | . |
. |
. |
G | P | D | S | L | S | Q | R | D | R | Q | A | F | A | A | E | L |
Query Conservation |   |
| . | . | . | . | . | . |
|
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|   |   |
|   |
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|   |
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|   |   |
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|   |   |
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|   |   |   |
|   |   |
|   |   |   |   |   |
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|   |   |
|   |   |
|   | . | . | . |
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|   |
|   |   |   |
|
|   |   |
|   |   |   |
|
Alig confidence |   |
| . | . | . | . | . | . |
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| . | . | . | . | . |
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| . | . | . |
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Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   | . | . | . | . | . |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | Y | G | F | L | A | E | N | A | D | F | A | E | L | C | E | A | C | Q | L | K | F | I | G | P | S | . |
. |
. |
. |
. |
Y | Q | S | I | Q | K | M | G | I | K | D | V | A | K | A | E | M | I | K | A | N | V | P | V | V | P | G | S | D | G | L | M | K | D | V | S | E | A | K | K | I | A | K | K | I |
Template Known Secondary structure |   |
| S | S | T | T | T | T |
|  |  |  |  |  |  |  |  | T | T | T |
|  |  | S | S | S |
| . | . | . | . | . |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  | T | T |
|
| B |
| S | B |
| S | S |
| B | S |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
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|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |