Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8D3
Confidence85.34%DateThu Jan 5 11:07:33 GMT 2012
Rank3Aligned Residues131
% Identity19%Templatec2dzdB_
PDB info PDB header:ligaseChain: B: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of the biotin carboxylase domain of2 pyruvate carboxylase
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40..... ....50.........60 ........ .70..
Predicted Secondary structure 

















..


.....



..
Query SS confidence 











































. .














. . . . .







. .



Query Sequence  TIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFI. . RTLRVAAGFDVADNE. . . . . IVRQCEAG. . DLVI
Query Conservation   
 






 


  
   
 
  
 
  


          
..  
 
  
 



  .....

     
..



Alig confidence 



.




..































..














.....







..



Template Conservation 



.   
 .. 
  




   
  

 
    
  
     

                
   
         
 

Template Sequence  KVLV. ANRGE. . IAIRVFRACTELGIRTVAIYSKEDVGSYHRYKADEAYLVGEGKKPIEAYLDIEGIIEIAKAHDVDAIH
Template Known Secondary structure  .


..TT

GGGGG
GGGGGSS
STTS
TT
TT

Template Predicted Secondary structure  .


..

























Template SS confidence 















































































   8.10. ..... ...20.........30.........40.........50.........60.........70.........80....
 
   73.. ....80.........90.........100.........110.........120... ......130.........140
Predicted Secondary structure 

......














...





Query SS confidence 


. . . . . .















































. . .
















Query Sequence  TAD. . . . . . IPLAAEAIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGIQTG. . . GPDSLSQRDRQAFAAEL
Query Conservation 


......




  
 


 

  

  

  

   
  
     

  
  
 ...


 
   

  
   
Alig confidence 


......
















.....

























...
















Template Conservation 
              
   

   

.....
        

          


 
           
        
Template Sequence  PGYGFLSENIQFAKRCREEGIIFIGP. . . . . NENHLDMFGDKVKARHAAVNAGIPVIPGSDGPVDGLEDVVAFAEAH
Template Known Secondary structure 

SSSSTT
TT
SS
.....
TSTTT

B

B
SS

SS
Template Predicted Secondary structure 












.....












Template SS confidence 












































































   85....90.........100.........110 .........120.........130.........140.........150......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions