Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8D3
Confidence44.72%DateThu Jan 5 11:07:33 GMT 2012
Rank19Aligned Residues131
% Identity17%Templatec1ulzA_
PDB info PDB header:ligaseChain: A: PDB Molecule:pyruvate carboxylase n-terminal domain; PDBTitle: crystal structure of the biotin carboxylase subunit of pyruvate2 carboxylase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40..... ....50........ .60..... ....70....
Predicted Secondary structure 

















..


...
..




Query SS confidence 











































. .












. . .






. .








Query Sequence  TIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFI. . RTLRVAAGFDVAD. . . NEIVRQC. . EAGDLVITA
Query Conservation   
 






 


  
   
 
  
 
  


          
..  
 
  
 



...  

   ..  






Alig confidence 



.




..































..












...






..








Template Conservation   


.   
 .. 
  
 



  
  

 
    
        

              
   
   
    

 
 
 
Template Sequence  KVLV. ANRGE. . IAVRIIRACKELGIPTVAIYNEVESTARHVKLADEAYMIGTDPLDTYLNKQRIINLALEVGADAIHPG
Template Known Secondary structure  S.


..T


GGGTT
SS

SSTT
TT



Template Predicted Secondary structure  .


..




























Template SS confidence 















































































   4... ..10.. .......20.........30.........40.........50.........60.........70.........80
 
   75....80.........90.........100.........110.........120... ......130.........140
Predicted Secondary structure  ......















...





Query SS confidence  . . . . . .
















































. . .
















Query Sequence  . . . . . . DIPLAAEAIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGIQTG. . . GPDSLSQRDRQAFAAEL
Query Conservation  ......





  
 


 

  

  

  

   
  
     

  
  
 ...


 
   

  
   
Alig confidence  ......

















.....

























...
















Template Conservation       
    
      

   

.....
        

          


 
           
        
Template Sequence  YGFLAENAEFAKMCEEAGITFIGP. . . . . HWKVIELMGDKARSKEVMKKAGVPVVPGSDGVLKSLEEAKALAREI
Template Known Secondary structure  SSTTTT
TT
SSS.....
STT

B

B
SSS


Template Predicted Secondary structure 











.....











Template SS confidence 










































































   81........90.........100.... .....110.........120.........130.........140.........150
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions