Return to main results Retrieve Phyre Job Id

Job DescriptionP37679
Confidence100.00%DateThu Jan 5 11:56:53 GMT 2012
Rank20Aligned Residues260
% Identity15%Templated2q02a1
SCOP infoTIM beta/alpha-barrel Xylose isomerase-like IolI-like
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  MRNHQLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDERLSRLDWSAAQRTSLVAAMIETGVGIPSMCLSAHRRF
Query Conservation        

    
   
        
   

  


                             

 
           
Alig confidence 













.






























....


























...
Template Conservation                .       
  
   
 




          ....       
   
   

 
        ...
Template Sequence  IEKTRFCINRKIAP. GLSIEAFFRLVKRLEFNKVELRNDXPSGSVT. . . . DDLNYNQVRNLAEKYGLEIVTINAVYP. . .
Template Known Secondary structure 

GGGGGG
T.TS
TT

TTSTTSSTT....TT

TT
TT...
Template Predicted Secondary structure 



.















....











...
Template SS confidence 















































































   3......10...... ...20.........30.........40....... ..50.........60.........70....
 
   81........90.........100.........110.........120.........130.........140.........150.........
Predicted Secondary structure 


























.
Query SS confidence 














































































.
Query Sequence  PFGSRDEAVRERAREIMSKAIRLARDLGIRTIQLAGYDVYYEDHDEGTRQRFAEGLAWAVEQAAASQVMLAVEIMDTAF.
Query Conservation       
   
          
  
  

   
    
                  
      
   

 
 

      .
Alig confidence  .....








































....




























.
Template Conservation  .....               
  
  

   
 
            ....     
  
   
   

 
 

       
Template Sequence  . . . . . FNQLTEEVVKKTEGLLRDAQGVGARALVLCPLNDGTIVPPE. . . . VTVEAIKRLSDLFARYDIQGLVEPLGFRVS
Template Known Secondary structure  .....TTS

T
S



SS



....TTT




STT
Template Predicted Secondary structure  .....













....









Template SS confidence 















































































   75....80.........90.........100.........110..... ....120.........130.........140.....
 
   160.........170.........180.........190.........200.........210.... .....220.........230......
Predicted Secondary structure  .



























..

















Query SS confidence  .






















































. .





















Query Sequence  . MNSISKWKKWDEMLASPWFTVYPDVGNLSAWGNDVPAELKLGIDRIAAIHLKDTQ. . PVTGQSPGQFRDVPFGEGCVDF
Query Conservation  .         

            
  
                  
  

  
  ..               


 

 
Alig confidence  .






















































..





















Template Conservation                         
                      
  


 
              
  

  
  
 
Template Sequence  SLRSAVWAQQLIREAGSPFKVLLDTFHHHLYEEAEKEFASRIDISAIGLVHLSGVEDTRPTEALADEQRIXLSEKDVXQN
Template Known Secondary structure  S


T



TT

GGG
B



S
GGG

GGG
B


TT
SS
Template Predicted Secondary structure 
















































Template SS confidence 















































































   146...150.........160.........170.........180.........190.........200.........210.........220.....
 
   237..240.........250......... 260.........270.......
Predicted Secondary structure 







.....



Query SS confidence 






















. . . . .

















Query Sequence  VGIFKTLHKLNYRGSFLIEMWTE. . . . . KAKEPVLEIIQARRWIEA
Query Conservation    
   
   

 
 
 

    .....   
           
  
Alig confidence 






















.....

















Template Conservation    

  
   

 
 

 
 
                  
   
 
Template Sequence  YQQVQRLENXGYRGIYAFEPFSSQLASWSEAEIEEQINRSVSLLLQ
Template Known Secondary structure  TT

S




GGGGG


Template Predicted Secondary structure 











Template SS confidence 













































   226...230.........240.........250.........260.........270.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions