Job Description P37679 Confidence 34.48% Date Thu Jan 5 11:56:53 GMT 2012 Rank 409 Aligned Residues 156 % Identity 14% Template d1vpya_ SCOP info TIM beta/alpha-barrel TM1631-like TM1631-like Resolution 2.52

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	L	G	I	Y	E	K	A	L	A	K	D	L	S	W	P	E	R	L	V	L	A	K	S	C	G	F	D	F	V	E	M	S	V	D	E	T	D	E	R	L	S	R	L	D	W	S	A	A	Q	R	T	S	L	V	A	A	M	I	E	T	G	V	G	I	P	S	M	C	L	S	A	H	R	R	F	P	F	G
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.										.							.	.									.	.	.	.															.
Template Conservation											.	.	.	.	.	.	.	.										.							.	.									.	.	.	.															.
Template Sequence		I	R	L	G	L	T	S	F	S	.	.	.	.	.	.	.	.	S	T	L	Y	E	Y	A	S	H	.	L	P	L	V	E	X	.	.	D	T	A	Y	Y	G	I	P	.	.	.	.	P	K	E	R	V	A	E	W	V	K	A	V	P	E	.	N	F	R	F	V	X	K	V	Y	S	G	I	S	C	Q	G	E	W
Template Known Secondary structure							S	T	T		.	.	.	.	.	.	.	.										.		S					.	.						S			.	.	.	.											T	S		T	.	T									T	T	T	T	T		S		G
Template Predicted Secondary structure											.	.	.	.	.	.	.	.										.							.	.									.	.	.	.															.
Template SS confidence
		2	.	.	.	.	.	.	.	10									.	.	.	.	.	.	.	.	.		20	.	.	.	.	.			.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		S	R	D	E	A	V	R	E	R	A	R	E	I	M	S	K	A	I	R	L	.	.	.	A	R	D	L	G	I	R	T	I	Q	L	A	G	Y	D	V	Y	Y	E	D	H	D	E	G	T	R	Q	R	F	A	E	G	L	A	W	A	V	E	Q	A	A	A	S	Q	V	M	L	A	V	E	I	M	D	T	A	F	M
Query Conservation																						.	.	.
Alig confidence																						.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.
Template Sequence		Q	T	Y	Y	A	S	E	E	E	X	I	T	A	F	L	E	S	X	A	P	L	I	E	S	K	K	L	F	A	F	L	V	Q	F	S	G	T	F	G	C	T	.	.	.	.	.	.	.	.	K	E	N	V	A	Y	L	Q	K	I	R	H	W	F	K	D	L	P	I	A	I	E	L	R	N	N	S	W	Y	Q	P
Template Known Secondary structure		G	G	T		S	S												T					T	T	T											T	T			S		.	.	.	.	.	.	.	.														T	T	T										G	G	G	G	S	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.									.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	I	S	K	W	K	K	W	D	E	M	L	A	S	P	W	F	T	V	Y	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	F	V	K	Q	X	L	Q	F	X	K	E	N	Q	F	S	L	V	I	V	D	E	P
Template Known Secondary structure		T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions