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Job DescriptionP37679
Confidence41.65%DateThu Jan 5 11:56:53 GMT 2012
Rank375Aligned Residues247
% Identity11%Templated1vpqa_
SCOP infoTIM beta/alpha-barrel TM1631-like TM1631-like
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  HQLGIYEKALAK. . . . . . . . DLSWPERLVLAKSC. GFDFVEMSVDETDERLSRLDWSAAQRTSLVAAM. IETGVGIPSMC
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Template Sequence  VYVGTSGFSFEDWKGVVYPEHLKPSQFLKYYWAVLGFRIVEL. . NFTYYTQP. . . . SWRSFVQMLRKTPPDFYFTVKTPG
Template Known Secondary structure  B
S

STTBTTTB
TT

GGGTS


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TTS
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   2.......10.........20.........30.........40... ......50. ........60.........70.....
 
   74.....80.........90.........100.........110.........120.........130.........140.........150...
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Query Sequence  LSAHRRFPFGSRDEAVRERAREIMSKAIRLARDLGIRTIQLAGYDVYYEDHDEGTRQRFAEGLAWAVEQAAASQVMLAVE
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Template Sequence  SVTHVLWKEGKDPKEDMENFTRQIEPLIE. EQRLKMTLAQFPFSFKFS. . . . . . . . . . . RKNVEYLEKLRESYPYELAVE
Template Known Secondary structure  TT

S.TT


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Query Sequence  IMDTAFMNSISKWKKWDEMLASPWFTVYPDVGNLSAWGNDVPAELKLGIDRIAAIHLKDTQPVTGQSPGQFRDVPFGEGC
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Template Sequence  FRHYSWDR. . EETYEFLRNHGITFVVVDEPKL. . . . PGLFPYRPITTTDYAYFRFHGRNERWFEAEGEERYDYLYSEEEL
Template Known Secondary structure 

BGGG
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TTTTT

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   144.....150. ........160.........170... ......180.........190.........200.........210.......
 
   234.....240.........250.........260.........270......
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Query Sequence  VDFVGIFKTLHKLNYRGSFLIEMWTEKAKEPVLEIIQARRWIE
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Template Sequence  KTLFEDVVELSRRVKETYVFFN. . NCYKGQAAINALQFKKMLE
Template Known Secondary structure  TTSS
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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