Job Description P37679 Confidence 33.95% Date Thu Jan 5 11:56:53 GMT 2012 Rank 412 Aligned Residues 190 % Identity 14% Template d1vc4a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.80

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	A	L	A	K	D	L	S	W	P	E	R	L	V	L	A	K	S	C	G	F	D	F	V	E	M	S	V	D	E	T	D	E	R	L	S	R	L	D	W	S	A	A	Q	R	T	S	L	V	A	A	M	I	E	T	G	V	G	I	P	S	M	C	L	S	A	H	R	R	F	P	F	G	S	R	D	E	A	V
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	G	L	I	R	E	V	D	P	V	E	A	A	L	A	Y	A	R	G	G	A	R	A	V	S	V	.	.	.	.	.	.	.	.	L	T	E	P	H	R	F	G	G	S	L	L	D	L	K	R	V	R	E	A	V	D	L	P	L	L	R	K	D	F	V	V	D	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T					S													T	T		S					.	.	.	.	.	.	.	.					S	S	S																S						S				S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.									.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	R	A	R	E	I	M	S	K	A	I	R	L	A	R	D	L	G	I	R	T	I	Q	L	A	G	Y	D	V	Y	Y	E	D	H	D	E	G	T	R	Q	R	F	A	E	G	L	A	W	A	V	E	Q	A	A	A	S	Q	V	M	L	A	V	E	I	M	D	T	A	F	M	N	S	I	S	K	W	K	K	W
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	P	F	M	L	E	E	A	R	A	F	G	A	S	A	A	L	L	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	L	G	E	L	T	G	A	Y	L	E	E	A	R	R	L	G	L	E	A	L	V	E	V	.	.	.	.	.	.	H	T	E	R	E	L	E	I	A
Template Known Secondary structure		.	.	.	.	.	.	.	.										T	T		S							.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G												T								.	.	.	.	.	.		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template SS confidence
										118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.														.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.							.	.	.	.	.	.	.	.	170
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		D	E	M	L	A	S	P	W	F	T	V	Y	P	D	V	G	N	L	S	A	W	G	N	D	V	P	A	E	L	K	L	G	I	D	.	.	.	.	R	I	A	A	I	H	L	K	D	T	Q	P	V	T	G	Q	S	P	G	Q	F	R	D	V	P	F	G	E	G	C	V	D	F	V	G	I	F	K	T	L	H	K
Query Conservation																																				.	.	.	.
Alig confidence				.																																.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	.	A	G	A	E	V	L	G	I	N	N	R	D	L	A	T	L	H	I	N	L	E	T	A	P	R	L	G	R	L	A	R	K	R	G	F	G	G	V	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	S	G	Y	S	R	K	E	E	L	K	A	L	E	G
Template Known Secondary structure				.		T		S						S	B		T	T	T			B		T	T												T	T			S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S				S						T	T	T	T
Template Predicted Secondary structure				.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.																						.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	Y	R	G	S	F	L	I	E	M	W	T	E	K	A	K	E	P	V	L	E	I	I	Q
Query Conservation
Alig confidence		.													.
Template Conservation		.													.
Template Sequence		.	L	F	D	A	V	L	I	G	T	S	L	M	.	R	A	P	D	L	E	A	A	L	R	E
Template Known Secondary structure		.	T		S										.	T	S	S
Template Predicted Secondary structure		.													.
Template SS confidence
			229	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions