Job Description P37679 Confidence 35.60% Date Thu Jan 5 11:56:53 GMT 2012 Rank 404 Aligned Residues 237 % Identity 14% Template d1rbla1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.20

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.													.
Query SS confidence																																										.	.	.	.	.													.
Query Sequence		D	L	S	W	P	E	R	L	V	L	A	K	S	C	G	F	D	F	V	E	M	S	V	D	E	T	D	E	R	L	S	R	L	D	W	S	A	A	Q	R	.	.	.	.	.	T	S	L	V	A	A	M	I	E	T	G	V	.	G	I	P	S	M	C	L	S	A	H	R	R	F	P	F	G	S	R	D	E	A	V
Query Conservation																																										.	.	.	.	.													.
Alig confidence																							.																			.	.	.	.	.													.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	.	T	K	D	D	E	N	I	N	S	Q	P	F	Q	R	W	R	D	R	F	L	F	V	A	D	A	I	H	K	S	Q	A	E	T	G	E	I	K	G	H	Y	L	N	V	T	A	P	T	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																		T	T		S		.					T	T		S	S	B	T	T	B																					S	S											S	S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.																																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.								.	.	.	.	160	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.
Query Sequence		R	E	R	A	R	E	I	M	S	K	A	I	R	L	A	R	D	L	G	I	R	T	I	Q	L	A	G	Y	D	V	Y	Y	E	D	H	D	E	G	T	R	Q	R	F	A	E	G	L	A	W	A	V	E	Q	A	A	A	S	Q	V	M	L	A	V	E	I	M	.	.	.	.	.	.	.	D	T	A	F	M	N	S
Query Conservation																																																																				.	.	.	.	.	.	.
Alig confidence		.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation		.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	C	E	E	M	M	K	R	A	E	F	A	K	E	L	G	M	P	I	I	M	H	D	F	L	T	A	G	.	.	.	.	.	.	.	.	.	.	.	.	F	T	A	N	T	T	L	A	K	W	C	R	D	N	G	V	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	R	N	H	G	I	H
Template Known Secondary structure		.	.	.	.														T	T		S											.	.	.	.	.	.	.	.	.	.	.	.															T								T	T						S		S	S	S	S
Template Predicted Secondary structure		.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.													.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	K	W	K	K	W	D	E	M	L	A	S	P	W	F	T	V	Y	P	D	V	G	N	L	S	A	W	G	N	D	V	P	A	E	L	K	L	G	I	D	R	I	A	A	I	H	L	K	D	T	Q	P	V	T	G	Q	S	P	G	Q	F	R	D	V	P	F	G	E	G	C	V	D	F	V	G	I	F	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	V	L	A	K	C	L	R	L	S	G	G	D	H	L	H	S	G	T	V	V	G	K	L	E	G	D	K	A	S	T	L	G	F	V	D	L	M	R	E	D	H	I	E	A	D	R	S	R	G	V	F	F	T	Q	D	W	A	S	M	P	G	V	L	P	V	A	S	G	G	I	H	V	W	H	M	P	A	L
Template Known Secondary structure															S							S	S	S	S	S																	S					B	G	G	G	T	B		S					T	T										S	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		L	H	K	L	N	Y	R	G	S	F	L	I	E	M	W	T	E	K	A	K	E	.	P	V	L	E	I	I	Q	A	R	R	W	I	E	A	R	M	Q
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		V	E	I	F	G	D	D	S	V	L	Q	F	G	G	G	T	L	G	H	P	W	G	N	A	P	G	A	T	A	N	R	V	A	L	E	A	C	V	Q
Template Known Secondary structure							S	S						S					T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions