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Job DescriptionP37679
Confidence90.08%DateThu Jan 5 11:56:53 GMT 2012
Rank89Aligned Residues200
% Identity13%Templated1nvma2
SCOP infoTIM beta/alpha-barrel Aldolase HMGL-like
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30....... ..40.........50.........60.........70.........80.........90........
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Query Sequence  ERLVLAKSCGFDFVEMS. . VDETDERLSRLDWSAAQRTSLVAAMIETGVGIPSMCLSAHRRFPFGSRDEAVRERAREIMS
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Template Sequence  AIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGS. . . . . . . . . . . . . . . . . V
Template Known Secondary structure  T
S
S
TTSTT

BTTTB

SS
TT
SSS
BTTB
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   34.....40.........50.........60.........70.........80.........90..... .
 
   99100.........110.........120.........130.........140....... ..150.........160.........170......
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Query Sequence  KAIRLARDLGIRTIQLAGYDVYYEDHDEGTRQRFAEGLAWAVEQAAASQ. . VMLAVEIMDTAFMNSISKWKKWDEMLASP
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Template Sequence  HDLKNAYQAGARVVRVATHCTE. . . . . . . . . . . . ADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGAT
Template Known Secondary structure  T

TT
............GGGGT
STTSS
T
S
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   97..100.........110........ .120.........130.........140.........150.........160....
 
   177..180........ .190.........200.. .......210....... ..220.........230.........240.
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Query Sequence  WFTVYPDVGNLS. AWGNDVPAELKLGI. . DRIAAIHLKDTQPVT. . . . . . . . . . . . GQSPGQFRDVPFGEGCVDFVGIFK
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Template Sequence  CIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDASLAGMGAGAGNAPLEVFIA
Template Known Secondary structure 
TT



S
TTS
B
TTS
TT

BGGG
SSTT
B
B
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   242.......
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Query Sequence  TLHKLNYR
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Template Sequence  VAERLGWN
Template Known Secondary structure  T
B
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   245....250..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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