Job Description P37679 Confidence 42.86% Date Thu Jan 5 11:56:53 GMT 2012 Rank 371 Aligned Residues 128 % Identity 20% Template d1lwha2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 2.60

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.												.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Query Sequence		W	P	E	R	L	V	L	A	K	S	C	G	F	D	F	V	E	M	S	V	D	E	T	D	.	.	.	.	.	.	.	.	.	.	.	E	R	L	S	R	L	D	W	S	A	A	Q	R	T	S	L	V	A	A	M	I	E	T	G	V	G	I	P	S	M	C	L	S	A	H	R	R	F	P	.	.	.	.	.	.
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	N	A	V	S	Y	L	K	E	L	G	I	D	F	V	W	L	M	P	V	F	S	S	I	S	F	H	G	Y	D	V	V	D	F	Y	S	F	K	A	E	Y	G	S	E	R	E	F	K	E	M	I	E	A	F	H	D	S	G	I	K	V	V	L	D	L	P	I	H	H	T	G	F	L	H	T	W	F	Q	K
Template Known Secondary structure					T							T	T		S											S	S	S	S			S		S							G	G	G																T	T									T	T	B			T	T	S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
																																																						82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	S	R	D	E	A	V	R	E	R	A	R	E	I	M	S	K	A	I	R	L	A	R	D	L	G	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		A	L	K	G	D	P	H	Y	R	D	Y	Y	V	W	A	N	K	E	T	D	L	D	E	R	R	E	W	D	G	E	K	I	W	H	P	L	E	D	G	R	F	Y	R	G	L	F	G	P	F	S	P	D	L	N	Y	D	N	P	Q	V	F	D	E	M	K	R	L	V	L	H	L	L	.	.	.	.	D	M	G	V
Template Known Secondary structure				T	T						T	T	B		B			T	T			T	T		B		S	S	S			B						T	T	S						T	T		T	T	S		B	B		T	T	S																.	.	.	.			T
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	I	Q	L	A	G	Y	D	V	Y	Y	E	D	H	D	E	G	T	R	Q	R	F	A	E	G	L	A	W	A	V	E	Q	A	A	A	S	Q	V	M	L	A	V	E	I	M	D	T	A
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.
Template Sequence		D	G	F	R	F	D	A	A	K	H	M	R	D	.	.	.	.	.	.	.	.	T	I	E	Q	N	V	R	F	W	K	Y	F	L	S	D	L	K	G	I	F	L	A	E	I	W	A	E	A
Template Known Secondary structure							T	T	G	G	G	S	S	S	.	.	.	.	.	.	.	.	S													T	T			S								S		S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.									.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions