Return to main results Retrieve Phyre Job Id

Job DescriptionP37679
Confidence64.22%DateThu Jan 5 11:56:53 GMT 2012
Rank267Aligned Residues52
% Identity23%Templated1bf2a3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30........ .40.........50.........60......
Predicted Secondary structure 



................................














Query SS confidence 



















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .



























Query Sequence  WPERLVLAKSCGFDFVEMSV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DETDERLSRLDWSAAQRTSLVAAMIETG
Query Conservation         
   

  


  ................................                           
Alig confidence 



















................................



























Template Conservation 
  




  


  
 
 

                     

   
   

   

         


 

  

  
Template Sequence  AGLKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAG
Template Known Secondary structure  TT

S

B
BS
TTTTSSTT

TT


S


BS
SS
B
GGG
S

STTTT
Template Predicted Secondary structure 


















































Template SS confidence 















































































   207..210.........220.........230.........240.........250.........260.........270.........280......
 
   67..70
Predicted Secondary structure 
Query SS confidence 



Query Sequence  VGIP
Query Conservation 
 
 
Alig confidence 



Template Conservation 
 

Template Sequence  IKVY
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   287..290
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions