Job Description P37679 Confidence 99.72% Date Thu Jan 5 11:56:53 GMT 2012 Rank 39 Aligned Residues 263 % Identity 12% Template d1a0da_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 3.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.						.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.																	.	.	.	.	.
Query SS confidence																																														.	.	.	.																	.	.	.	.	.
Query Sequence		W	P	E	R	L	V	L	A	K	S	C	G	F	D	F	V	E	M	S	V	D	E	T	D	E	R	L	S	R	L	D	W	S	A	A	Q	R	T	S	L	V	A	A	M	.	.	.	.	I	E	T	G	V	G	I	P	S	M	C	L	S	A	H	R	.	.	.	.	.	R	F	P	F	G	S	R	D	E	A	V
Query Conservation																																														.	.	.	.																	.	.	.	.	.
Alig confidence																																														.	.	.	.																	.	.	.	.	.
Template Conservation
Template Sequence		V	E	A	A	F	E	F	F	E	K	L	N	I	P	F	F	C	F	H	D	V	D	I	A	P	E	G	E	T	L	K	E	T	Y	K	N	L	D	I	I	V	D	M	I	E	E	Y	M	K	T	S	K	T	K	L	L	W	N	T	A	N	L	F	T	H	P	R	F	V	H	G	A	A	T	S	C	N	A	D	V
Template Known Secondary structure													T		S										S				S	S																				T	T		S											S	S	S	G	G	G	T	T		S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.								.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.																													.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.																													.	.	.	.	.	.	.
Query Sequence		R	E	R	A	R	E	I	M	S	K	A	I	R	L	A	R	D	L	G	I	R	T	I	Q	L	A	G	Y	D	V	Y	Y	E	D	H	.	.	.	.	D	E	G	T	R	Q	R	F	A	E	G	L	A	W	A	V	E	Q	A	A	A	S	Q	V	M	L	A	V	.	.	.	.	.	.	.	E	I	M	D	T	A
Query Conservation																																					.	.	.	.																													.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.																													.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	Y	A	A	A	K	V	K	K	G	L	E	I	A	K	R	L	G	A	E	N	Y	V	F	W	G	G	R	E	G	Y	E	T	L	L	N	T	D	M	K	L	E	L	D	N	L	A	R	F	L	H	M	A	V	D	Y	A	K	E	I	G	F	D	G	Q	F	L	I	E	P	K	P	K	E	P	T	K	H	Q
Template Known Secondary structure																				T		S							T	T	S			S		G	G	G																								T	T			S								S		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																					.																									.	.
Query SS confidence																					.																									.	.
Query Sequence		F	M	N	S	I	S	K	W	K	K	W	D	E	M	L	A	S	P	W	.	F	T	V	Y	P	D	V	G	N	L	S	A	W	G	N	D	V	P	A	E	L	K	L	G	.	.	I	D	R	I	A	A	I	H	L	K	D	T	Q	P	V	T	G	Q	S	P	G	Q	F	R	D	V	P	F	G	E	G	C	V	D
Query Conservation																					.																									.	.
Alig confidence																					.																									.	.																							.	.	.
Template Conservation																																																																						.	.	.
Template Sequence		Y	D	F	D	V	A	T	A	L	A	F	L	Q	T	Y	G	L	K	D	Y	F	K	F	N	I	E	A	N	H	A	T	L	A	G	H	T	F	E	H	E	L	R	V	A	R	I	H	G	M	L	G	S	V	D	A	N	Q	G	D	M	L	L	G	W	D	T	D	E	.	.	.	F	P	T	D	L	Y	S	T	T
Template Known Secondary structure		S	S		S											T	T		G	G	G													T	T													T	T									B			T	T	S	S	S				B	.	.	.
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.				.	.	310	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.						.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																.																			.	.	.	.	.
Query SS confidence																.																			.	.	.	.	.
Query Sequence		F	V	G	I	F	K	T	L	H	K	L	N	Y	R	.	G	S	F	L	I	E	M	W	T	E	K	A	K	E	P	V	L	E	.	.	.	.	.	I	I	Q	A	R	R	W	I	E	A	R	M	Q	E	A	G	F	I
Query Conservation																.																			.	.	.	.	.
Alig confidence				.												.																			.	.	.	.	.
Template Conservation				.
Template Sequence		L	A	.	M	Y	E	I	L	K	N	G	G	L	G	R	G	G	L	N	F	D	A	K	V	R	R	G	S	F	E	P	E	D	L	F	Y	A	H	I	A	G	M	D	S	F	A	V	G	L	K	V	A	H	R	L	I
Template Known Secondary structure				.							T	T	S		T	T											T	T			S	T
Template Predicted Secondary structure				.
Template SS confidence
		317	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions