Job Description P37679 Confidence 89.88% Date Thu Jan 5 11:56:53 GMT 2012 Rank 90 Aligned Residues 112 % Identity 11% Template c3ugsB_ PDB info PDB header:transferase Chain: B: PDB Molecule:undecaprenyl pyrophosphate synthase; PDBTitle: crystal structure of a probable undecaprenyl diphosphate synthase2 (upps) from campylobacter jejuni Resolution 2.46 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.
Query SS confidence																																												.	.	.	.
Query Sequence		R	E	R	A	R	E	I	M	S	K	A	I	R	L	A	R	D	L	G	I	R	T	I	Q	L	A	G	Y	D	V	Y	Y	E	D	H	D	E	G	T	R	Q	R	.	.	.	.	F	A	E	G	L	A	W	A	V	E	Q	A	A	A	S	Q	V	M	L	A	V	E	I	M	D	T	A	F	M	N	S	I	S	K
Query Conservation																																												.	.	.	.
Alig confidence																																												.	.	.	.
Template Conservation
Template Sequence		R	S	Q	G	V	K	T	M	Q	K	L	M	E	V	C	M	E	E	N	I	S	N	L	S	L	F	A	F	S	T	E	N	W	K	R	P	K	D	E	I	D	F	I	F	E	L	L	D	R	C	L	D	E	A	L	E	K	F	E	K	N	N	V	R	L	R	A	I	G	D	L	S	R	L	E	D	K	V	R	E
Template Known Secondary structure																			T	T											S	G	G	G	G	S																							S	T	T	T	T							S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	K	K	W	D	E	M	L	A	S	P	W	F	T	V	Y	P	D	V	G	N	L	S	A	W	G	N	D	V	P	A	E	L	K	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	T	L	V	E	E	K	T	K	H	C	D	A	L	C	V	N	L	A	I	S	Y	G	A	R	D	E	I	I	R	A	A	K	R	V
Template Known Secondary structure											T	T			S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions